Alternatives and similar repositories for latentcor

Users that are interested in latentcor are comparing it to the libraries listed below

• irinagain / mixedCCA
  R package for sparse canonical correlation analysis with mixed data types (continuous, binary, zero-truncated)
  ☆22Updated 2 years ago
• jsilve24 / fido
  Multinomial Logistic-Normal Models (really fast)
  ☆21Updated 6 months ago
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated 2 years ago
• gtonkinhill / TCGA_analysis
  ☆27Updated 2 years ago
• shaunpwilkinson / kmer
  K-mer Counting for Biological Sequence Analysis
  ☆27Updated 6 years ago
• adwolfer / santaR
  Interactive package for Short AsyNchronous Time-series Analysis (SANTA) in R, implemented in Shiny
  ☆11Updated last year
• StoreyLab / qvalue
  R package to estimate q-values and false discovery rate quantities.
  ☆117Updated 2 years ago
• himelmallick / Tweedieverse
  Differential analysis of multi-omics data based on the Tweedie distribution
  ☆28Updated last year
• reptalex / phylofactor
  ☆27Updated last year
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆25Updated last year
• nullranges / nullranges
  Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…
  ☆27Updated 5 months ago
• shchurch / countland
  tools in python and R for analyzing biological count data, especially from single cell RNAseq
  ☆22Updated last year
• gusevlab / hsq_ancestry_examples
  Toy simulations and analyses of heritability and genetic differences
  ☆11Updated last year
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• ggloor / ALDEx_bioc
  ALDEx_bioc is the working directory for updating bioconductor
  ☆28Updated 4 months ago
• andrewGhazi / malacoda
  Bayesian analysis of MPRA and other high-throughput genomic assays
  ☆10Updated 5 years ago
• shaunpwilkinson / aphid
  Analysis with Profile Hidden Markov Models
  ☆22Updated last year
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆16Updated last month
• jchiquet / aricode
  R package for computation of (adjusted) rand-index and other such scores
  ☆27Updated last year
• stephaniehicks / qsmooth
  Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…
  ☆52Updated 2 years ago
• lasy / alto
  'alto' is an R package that aligns topics from different LDA models, computes metrics for quantifying the goodness of alignment, and prov…
  ☆16Updated last year
• jtleek / sva-devel
  ☆29Updated last year
• stephenslab / mashr
  An R package for multivariate adaptive shrinkage.
  ☆92Updated 9 months ago
• csoneson / treeclimbR
  ☆20Updated last month
• JEFworks-Lab / genomic-data-visualization-2024
  Course website for Genomic Data Visualization 2024
  ☆26Updated last year
• kpj / rwrap
  Seamlessly integrate R packages into Python.
  ☆21Updated 2 years ago
• markrobinsonuzh / TreeSummarizedExperiment
  An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
  ☆14Updated last month
• vdblab / FLORAL
  Fit LOg-RAtio Lasso regression for compositional covariates
  ☆13Updated last month
• waldronlab / SingleCellMultiModal
  Single Cell multimodal data scripts for downloading datasets
  ☆17Updated 2 months ago
• zdk123 / compPLS
  An R package for Partial Least Squares analysis and plotting for (high dimensional) compositional data
  ☆20Updated 3 years ago