Alternatives and similar repositories for monarch-legacy:

Users that are interested in monarch-legacy are comparing it to the libraries listed below

• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 2 years ago
• monarch-initiative / monarch-disease-ontology-RETIRED
  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
  ☆17Updated 4 years ago
• phenopackets / phenopacket-format
  ☆26Updated 5 years ago
• TheJacksonLaboratory / hpo-web
  a web application to search and navigate the Human Phenotype Ontology (HPO)
  ☆14Updated last month
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆15Updated last month
• monarch-initiative / owlsim-v3
  Ontology Based Profile Matching
  ☆17Updated 2 years ago
• opencb / biodata
  Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bu…
  ☆30Updated last week
• monarch-initiative / phenol
  phenol: Phenotype ontology library
  ☆23Updated 8 months ago
• TheJacksonLaboratory / HPOworkbench
  Human Phenotype Ontology Workbench
  ☆18Updated last year
• TheJacksonLaboratory / LIRICAL
  LIkelihood Ratio Interpretation of Clinical AbnormaLities
  ☆25Updated last month
• opencb / iva
  Generic Interactive Variant Analysis browser
  ☆29Updated 2 years ago
• bio-tools / biotoolsSchema
  biotoolsSchema : Tool description data model for computational tools in life sciences
  ☆37Updated last year
• monarch-initiative / phenopacket-store
  Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.
  ☆23Updated this week
• microbiomedata / nmdc-metadata
  Managing metadata and policy around metadata in NMDC
  ☆2Updated 10 months ago
• ga4gh-beacon / specification
  GA4GH Beacon specification.
  ☆32Updated 2 years ago
• obophenotype / upheno
  The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
  ☆78Updated 3 weeks ago
• phenopackets / phenopacket-schema
  Repository for the GA4GH phenopacket schema
  ☆84Updated 5 months ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆46Updated 2 weeks ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• griffithlab / civic-meeting
  Repo for advertising and organizing CIViC unconference/meeting activities
  ☆10Updated last year
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆24Updated 6 months ago
• biocompute-objects / BCO_Documentation
  Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:
  ☆16Updated 7 months ago
• pato-ontology / pato
  PATO - the Phenotype And Trait Ontology
  ☆58Updated last week
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆40Updated last week
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 2 years ago
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆18Updated this week
• dcppc / data-stewards
  Questions and answers about TOPmed, GTEx, and AGR resources.
  ☆8Updated 6 years ago
• monarch-initiative / HpoTextMining
  Perform text mining for identification of HPO terms in free text from scientific publication.
  ☆12Updated 8 months ago
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆58Updated last week