Alternatives and similar repositories for pyEnsemblRest

Users that are interested in pyEnsemblRest are comparing it to the libraries listed below

• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated 2 weeks ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆57Updated last year
• openvax / topiary
  Predict mutated T-cell epitopes from sequencing data
  ☆30Updated 9 months ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• openvax / varcode
  Library for manipulating genomic variants and predicting their effects
  ☆85Updated last year
• aboyle / F-seq
  A Feature Density Estimator for High-Throughput Sequence Tags
  ☆22Updated 4 years ago
• lcdb / lcdb-wf
  Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis
  ☆23Updated last week
• kundajelab / ENCODE_downloader
  Downloader for ENCODE
  ☆32Updated 5 years ago
• gagneurlab / MMSplice_MTSplice
  Tissue-specific variant effect predictions on splicing
  ☆42Updated 2 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• brentp / python-giggle
  python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.
  ☆15Updated 7 years ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆42Updated 5 years ago
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆29Updated 6 months ago
• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆51Updated 2 years ago
• quinlan-lab / pathoscore
  pathoscore evaluates variant pathogenicity tools and scores.
  ☆22Updated 3 years ago
• brentp / geneimpacts
  prioritize effects of variant annotations from VEP, SnpEff, et al.
  ☆34Updated last year
• cgat-developers / cgat-core
  Core functionality of the CGAT code
  ☆34Updated 3 months ago
• brentp / align
  sequence alignment. global, local, glocal.
  ☆42Updated 8 years ago
• bigdatagenomics / cannoli
  Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.
  ☆41Updated 9 months ago
• omarwagih / rmimp
  Predicting the impact of mutations on kinase–substrate phosphorylation
  ☆10Updated 2 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 3 years ago
• markrobinsonuzh / CrispRVariants
  ☆26Updated 5 years ago
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆66Updated 8 months ago
• epiviz / epiviz
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…
  ☆71Updated 2 years ago
• openvax / vaxrank
  Ranked vaccine peptides for personalized cancer immunotherapy
  ☆59Updated last year
• ding-lab / hotspot3d
  3D hotspot mutation proximity analysis tool
  ☆50Updated 2 years ago
• brentp / bw-python
  python wrapper to dpryan79's bigwig library using cffi
  ☆19Updated 9 years ago
• diskin-lab-chop / AutoGVP
  ☆23Updated this week