gawbul / pyEnsemblRest
A client for the Ensembl REST API written in the Python programming language
☆26Updated 3 months ago
Alternatives and similar repositories for pyEnsemblRest:
Users that are interested in pyEnsemblRest are comparing it to the libraries listed below
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 3 months ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 7 months ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆34Updated 2 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 3 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 7 years ago
- ☆21Updated last week
- ☆30Updated 4 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- The Loss-of-Function ToolKit (LoFTK) allows efficient and automated prediction of LoF variants from both genotyped and sequenced genomes,…☆9Updated last year
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆26Updated this week
- ☆24Updated 4 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 2 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆20Updated last year
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆23Updated 10 months ago
- What's The Function of these genes?☆22Updated 7 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- 3D hotspot mutation proximity analysis tool☆46Updated last year
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 3 months ago
- iCAGES (integrated CAncer GEnome Score) is an effective tool for prioritizing cancer driver genes for a patient☆14Updated 2 years ago
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆25Updated 5 months ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆21Updated last month
- Validate FastQ Files☆36Updated 6 years ago
- Simplify snpEff annotations for interesting cases☆21Updated 6 years ago