Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.
☆13Jul 31, 2026Updated 3 months ago
Alternatives and similar repositories for ondisc
Users that are interested in ondisc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.☆42Updated this week
- Feature Selection in scRNA-seq☆11Sep 9, 2021Updated 5 years ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆46Jun 18, 2023Updated 3 years ago
- Analysis code for the TAP-seq manuscript.☆13Jun 25, 2021Updated 5 years ago
- Extended ComplexHeatmap☆12Jan 5, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Causal inference, differential expression, and co-expression for scRNA-seq☆22Jun 11, 2026Updated 4 months ago
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated last year
- Build predicted cell-cell interaction networks from single-cell data.☆10Jan 31, 2023Updated 3 years ago
- R package for LuaJIT scripting☆32Sep 15, 2026Updated last month
- Single-cell differential expression☆22Oct 18, 2026Updated 2 weeks ago
- An R package that integrates the installation, execution, and benchmark of cutting-edge computational doublet-detection methods.☆12Dec 4, 2022Updated 3 years ago
- A quick, free tool for single-cell annotation using large language models☆13Nov 27, 2025Updated 11 months ago
- Gain biological insights using LLM.☆14Jan 26, 2026Updated 9 months ago
- Fast algorithms for GLM-PCA.☆19Mar 12, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆128Sep 29, 2025Updated last year
- Perturbational analysis by causality-aware generative model for single-cell RNA-sequencing data☆24Oct 7, 2026Updated 3 weeks ago
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- A pipeline for Nanopore single cell isoform quantification in R☆14Oct 19, 2026Updated 2 weeks ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- anor: an annotation and visualization system based on R and Shiny framework☆32Apr 20, 2020Updated 6 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- AIDE: annotation-assisted isoform discovery and quantification from RNA-seq data☆16Aug 6, 2022Updated 4 years ago
- The Isoforms from Single-Cell; Long-read Expression Suite☆43Jan 14, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Provide RNA and DNA Foundation Model Benchmarks and Applications☆29Nov 26, 2025Updated 11 months ago
- R package for CS-CORE, a statistical method for cell-type-specific co-expression inference from single cell RNA-sequencing data☆32May 4, 2026Updated 5 months ago
- A high-performance R package for single-cell genomics☆22Oct 5, 2026Updated 3 weeks ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated 2 years ago
- ☆31Mar 12, 2026Updated 7 months ago
- ☆19Jun 2, 2022Updated 4 years ago
- A reimplementation of the fastLm function of RcppEigen for big.matrix objects for fast out-of-memory linear model fitting☆13Jul 14, 2017Updated 9 years ago
- Make DenseLines Heatmaps with 'ggplot2'☆12Jun 26, 2026Updated 4 months ago
- Awesome GRN enhanced AnnData toolkit☆13Feb 19, 2026Updated 8 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Cluster Evaluation R package (ClueR) for detecting key signaling events from time-series phosphoproteomics data☆11Jan 10, 2024Updated 2 years ago
- Implementation of the Leiden algorithm called by reticulate in R. (CRAN)☆44May 26, 2024Updated 2 years ago
- A slimmed down version of scran, based on the C++ library of the same name.☆10Oct 15, 2024Updated 2 years ago
- R bindings to html-tidy C interface☆15Aug 15, 2022Updated 4 years ago
- A end-to-end scRNA-seq analysis pipeline for cross-group comparison☆20Updated this week
- Tutorial: An Introduction to Futureverse for Parallel Processing in R (useR! 2022)☆10May 8, 2023Updated 3 years ago
- Single-cell immune repertoire trajectory analysis in R☆12Aug 8, 2025Updated last year