Tidy up computational biology objects
☆50Feb 1, 2019Updated 7 years ago
Alternatives and similar repositories for biobroom
Users that are interested in biobroom are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated 2 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 11 years ago
- ☆43Apr 20, 2016Updated 10 years ago
- zero-inflated negative binomial gene expression in R☆20Jan 31, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A grammar of genomic data transformation☆154Jun 3, 2026Updated 3 weeks ago
- Bioconductor cheat sheet☆192Aug 26, 2024Updated last year
- Response to blog post about Salmon☆37Sep 3, 2017Updated 8 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- g-suite add-on for merging sheets data into docs templates☆11Jun 21, 2019Updated 7 years ago
- MSigDB gene sets for multiple organisms in a tidy data format☆87Mar 12, 2026Updated 3 months ago
- Fit phenomenological sigmoid and impulse curves with priors to improve interpretability☆10May 29, 2024Updated 2 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Feb 20, 2018Updated 8 years ago
- R/txshift: Efficient Estimation of the Causal Effects of Stochastic Interventions, with Corrections for Outcome-Dependent Sampling☆14Sep 21, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆127Jun 9, 2022Updated 4 years ago
- Gene Set Enrichment Analysis Made Awesome☆12May 11, 2018Updated 8 years ago
- Transcript quantification import for modular pipelines☆145Apr 15, 2026Updated 2 months ago
- Computational Systems Biology course material☆12Dec 12, 2013Updated 12 years ago
- logistic factor analysis☆16Jan 29, 2026Updated 5 months ago
- R data package for annotating/converting Gene IDs☆170Jul 6, 2025Updated 11 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 3 years ago
- TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 o…☆49Jan 1, 2020Updated 6 years ago
- Sankey Diagrams☆23Jan 15, 2016Updated 10 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- R htmlwidget wrapper around the D3 scatterplot matrix☆10Feb 3, 2015Updated 11 years ago
- R package to calculate tide heights☆15Nov 20, 2024Updated last year
- Repository for signature genes from Immune Cell Atlas☆20Sep 25, 2019Updated 6 years ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Dec 12, 2018Updated 7 years ago
- Implementation of the matrixStats API for sparse matrices☆55Apr 2, 2025Updated last year
- Syntactic ggplot2 Sugar for a Tidy World☆26Sep 18, 2016Updated 9 years ago
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 7 years ago
- A collection of papers and books that Storey Lab members should read and others may find useful☆48Oct 19, 2015Updated 10 years ago
- ☆74Mar 1, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An R package of utilities for benchmarking and optimization☆48Aug 11, 2023Updated 2 years ago
- Fast covariance, correlation, and cosine similarity.☆37Nov 23, 2021Updated 4 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 3 years ago
- htmlwidgets for comic (xkcd-like) R☆16Jul 21, 2016Updated 9 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated last month
- Clone identification from single-cell data☆65Nov 10, 2022Updated 3 years ago
- Links to slides for talks at the 2016 Joint Statistical Meetings in Chicago☆79Apr 25, 2022Updated 4 years ago