☆10Sep 3, 2026Updated last month
Alternatives and similar repositories for UniOP
Users that are interested in UniOP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Plugin that provides pairing functions to the Polars library☆14Oct 14, 2026Updated 2 weeks ago
- SpacePHARER CRISPR Spacer Phage-Host pAiRs findER☆48May 8, 2024Updated 2 years ago
- From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax☆37Aug 28, 2026Updated 2 months ago
- Targeted Detection and Reconstruction of Plasmids☆22May 7, 2024Updated 2 years ago
- Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.☆11Mar 25, 2026Updated 7 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆11Sep 16, 2020Updated 6 years ago
- Wrapper for short and long read mapping, creation of quality report(s) and estimation of genome size☆12Sep 30, 2025Updated last year
- Just another minhash implementation.☆13Updated this week
- Whole genome core alignments from multiple draft genomes☆13Sep 14, 2016Updated 10 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆31Mar 25, 2023Updated 3 years ago
- SWORD - a highly efficient protein database search☆26Jan 15, 2024Updated 2 years ago
- Tejaas - a tool for discovering trans-eQTLs☆12Oct 14, 2022Updated 4 years ago
- Finding regions of similarity between plasmids☆17Jul 15, 2026Updated 3 months ago
- Bayesian multiple logistic regression for GWAS meta-analysis☆17Aug 20, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A toolbox for working with genome trees.☆10May 20, 2026Updated 5 months ago
- A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.☆20Aug 7, 2026Updated 2 months ago
- Repository for Bioinformatics scripts and basic programs developed by L.M.C☆10Jun 2, 2023Updated 3 years ago
- Discovery of conserved gene clusters in multiple genomes☆135Oct 22, 2026Updated last week
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆17Feb 1, 2021Updated 5 years ago
- Best-practice analysis pipeline for mapping reads to a (large) collections of genomes☆13Updated this week
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆60Sep 13, 2026Updated last month
- 🦠 A tool for identifying and analyzing functions in microbial genomes.☆16Sep 25, 2024Updated 2 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- TransAnnot - a fast transcriptome annotation pipeline☆20Jan 22, 2025Updated last year
- A deep learning method for the prediction of phage-bacteria interactions based on key genes☆10Dec 16, 2024Updated last year
- Fast implementation of HMMSEARCH optimized for high-memory systems using PyHMMER☆12Jan 13, 2026Updated 9 months ago
- A package for Unicode-friendly string compression using Unishox2☆24Nov 5, 2022Updated 3 years ago
- Finding prophage regions in bacterial genomes using brute force☆22Jan 20, 2023Updated 3 years ago
- Open compressed files in Python☆82Updated this week
- CRISPR-Cas systems models for MacSyFinder☆10Dec 5, 2025Updated 10 months ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆23Mar 8, 2024Updated 2 years ago
- kClust is a fast and sensitive clustering method for the clustering of protein sequences. It is able to cluster large protein databases d…☆18Feb 12, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A biological dual-language foundation model☆11Jun 16, 2025Updated last year
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆41Sep 28, 2025Updated last year
- Package to extract Unannotated Regions from prokaryotic genomes report coding and pseudogenised genes delimited by stop codons - Named S…☆17Jul 20, 2026Updated 3 months ago
- ☆20Jul 16, 2021Updated 5 years ago
- Client-side proxy service for connecting a workstation to CBorg API Services☆14Oct 21, 2026Updated last week
- PyO3 bindings and Python interface to sylph, an ultrafast method for containment ANI querying and taxonomic profiling.☆20Sep 1, 2026Updated last month
- Source code for The Protein Design Archive web application.☆10Oct 16, 2026Updated last week