Application for semi-automated genomic annotation.
☆19Jun 10, 2026Updated last month
Alternatives and similar repositories for segway
Users that are interested in segway are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Explore the Hi-Cs☆12Nov 30, 2025Updated 7 months ago
- The PanGenome Graph Builder☆17Jul 17, 2024Updated 2 years ago
- Code for the paper AdvST: Revisiting Data Augmentations for Single Domain Generalization (AAAI 2024)☆14May 6, 2024Updated 2 years ago
- convert CHAIN format to PAF format☆15Dec 17, 2024Updated last year
- Optimized sequence graph implementations for graph genomics☆37Jun 30, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ChIP-seq peak caller for reads mapped to a graph-based reference genome☆26Aug 17, 2024Updated last year
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- Single Cell multimodal data scripts for downloading datasets☆19May 20, 2026Updated 2 months ago
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- ☆100Jun 16, 2026Updated last month
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆12Mar 11, 2020Updated 6 years ago
- A toolkit for exploring regions of variation in pangenomes☆15Jun 12, 2026Updated last month
- Ultra-fast 5' and 3' demultiplexer☆30Apr 23, 2024Updated 2 years ago
- a nextflow pipeline for creating a pangenome with minigraph-cactus☆16Sep 13, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- guix packages for bioinformatics software☆23Jan 22, 2024Updated 2 years ago
- (Conditional) Independence testing & Markov blanket feature selection using k-NN mutual information and conditional mutual information es…☆30Jun 16, 2020Updated 6 years ago
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 9 years ago
- TI TMS570 (ARM Cortex R4) embedded C firmware☆12Mar 9, 2024Updated 2 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Jun 26, 2026Updated 3 weeks ago
- Molecular interactions inference from single-cell multi-omics data☆31May 7, 2026Updated 2 months ago
- Creating large realisations of random fields on the sphere☆10Updated this week
- various tools to download, convert and process the full text of scientific articles☆10Apr 2, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Genome databases generation pipeline for ngs.plot and region_analysis.☆17Sep 8, 2015Updated 10 years ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- A short tandem repeat (STR) genotyping and analysis toolkit for long reads☆19Updated this week
- official build specifications for jupyter☆13Jun 3, 2021Updated 5 years ago
- Pipeline to analyse ChIP-Rx data, i.e ChIP-Seq with reference exogenous genome spike-in normalization☆14Apr 11, 2026Updated 3 months ago
- semi-reference-based short read compression☆11Mar 5, 2019Updated 7 years ago
- A personal redirect service written in Rust☆19Apr 22, 2026Updated 2 months ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆42Jun 30, 2026Updated 3 weeks ago
- A high performance MCP client sdk for python☆18Apr 8, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- A hash map using the BooPHF perfect hash function☆13Sep 25, 2016Updated 9 years ago
- Tweaks for AUCtex☆21Mar 22, 2023Updated 3 years ago
- Software for error-tolerant coding of information into DNA sequences using finite-state transducers.☆12Jan 8, 2017Updated 9 years ago
- GRAph-based Finding of Individual Motif Occurrences☆31Aug 29, 2024Updated last year
- convert variation graph alignments to coverage maps over nodes☆27Jan 21, 2026Updated 6 months ago
- ☆11Feb 21, 2023Updated 3 years ago