hiranumn / DeepAccNet-TF
Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)
☆10Updated 4 years ago
Alternatives and similar repositories for DeepAccNet-TF:
Users that are interested in DeepAccNet-TF are comparing it to the libraries listed below
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 5 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 6 years ago
- test☆14Updated 4 years ago
- Fast and easy contact prediction.☆38Updated 9 months ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆25Updated last year
- an ultra-fast and accurate program for deterministic protein sidechain packing☆29Updated 2 weeks ago
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆22Updated 5 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ☆9Updated last year
- This repo contains the collection of codes to find designer interfacial mutations☆16Updated last year
- DLPacker☆29Updated 6 months ago
- ☆19Updated last year
- Fully convolutional neural networks for protein residue-residue contact prediction☆44Updated 5 years ago
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 3 years ago
- Contact map alignment☆16Updated 6 years ago
- ☆29Updated 4 years ago
- Contact map alignment☆41Updated 4 years ago
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆23Updated 2 years ago
- ☆34Updated 3 years ago
- DeepDom is an ab-initio method for protein domain boundary prediction☆15Updated 2 years ago
- to assess structural quality of RNA using 3D CNN☆13Updated 6 years ago
- Some Rosetta Scripts that allow for various simple tasks☆13Updated 5 years ago
- ☆13Updated 7 years ago
- Deep convolutional neural networks for protein contact map prediction☆23Updated 5 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated 11 months ago
- ☆19Updated 2 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆37Updated 4 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆50Updated this week
- some tools for working with protein (PDB) files in tensorflow☆11Updated 5 years ago