A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict antibody viscosity.
☆29Oct 6, 2022Updated 3 years ago
Alternatives and similar repositories for DeepSCM
Users that are interested in DeepSCM are comparing it to the libraries listed below
Sorting:
- ☆26Apr 22, 2024Updated last year
- ☆45Apr 1, 2025Updated 10 months ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆13Apr 23, 2024Updated last year
- A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org☆10Apr 20, 2020Updated 5 years ago
- A Collection of Platform, Tools, and Resources for Antibody Engineering☆21Jun 30, 2023Updated 2 years ago
- ☆17Jan 9, 2023Updated 3 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆21Updated this week
- Prediction of protein melting temperatures directly from sequences☆12Apr 16, 2024Updated last year
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆14Sep 8, 2023Updated 2 years ago
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…☆19Updated this week
- EvolveX, a de novo antibody computational design pipeline.☆22Sep 18, 2025Updated 5 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Mar 18, 2023Updated 2 years ago
- ☆40Aug 19, 2024Updated last year
- Antibody-specific masked language model☆68Jul 16, 2023Updated 2 years ago
- Fitness landscapes for antibodies☆152Dec 23, 2025Updated 2 months ago
- An antibody-specific language model focusing on NGL prediction☆36Aug 22, 2024Updated last year
- ☆51Aug 21, 2023Updated 2 years ago
- PPI version of Pythia☆27Sep 12, 2025Updated 5 months ago
- MDplot: Visualise Molecular Dynamics☆30Mar 23, 2022Updated 3 years ago
- Tools for annotation, processing and ML for antibody sequences☆40Feb 20, 2026Updated last week
- Assessing the impact of mutations on antibody-antigen binding affinity☆18Dec 7, 2020Updated 5 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Jul 8, 2024Updated last year
- Quantifying the nativeness of antibody sequences using long short-term memory networks☆18Dec 17, 2021Updated 4 years ago
- Repo of AntiBMPNN project for antibody sequence design.☆29May 28, 2025Updated 9 months ago
- Material to run the HADDOCK antibody-antigen modelling protocol☆23Feb 3, 2026Updated 3 weeks ago
- ☆22May 14, 2019Updated 6 years ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆61Oct 25, 2023Updated 2 years ago
- nanobody melting temperature prediction using protein embeddings☆11Feb 24, 2025Updated last year
- ☆17May 15, 2025Updated 9 months ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆56Updated this week
- ☆23Jul 4, 2021Updated 4 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 9 months ago
- Constant pH simulation with OpenMM☆18Mar 26, 2025Updated 11 months ago
- Sapiens is a human antibody language model based on BERT.☆72Jan 22, 2026Updated last month
- Protein design and variant prediction using autoregressive generative models☆24Feb 27, 2023Updated 3 years ago
- Polyreactivity Website☆21Jun 26, 2023Updated 2 years ago
- SE(3) diffusion models for generating CDR loops☆10Feb 6, 2024Updated 2 years ago
- open source repository☆146Nov 30, 2023Updated 2 years ago
- Predict the binding affinity of protein-protein complexes from structural data☆176Oct 3, 2025Updated 4 months ago