decarboxy / py_protein_utilsLinks
Python utilities for handling Rosetta output and PDB files
☆16Updated 13 years ago
Alternatives and similar repositories for py_protein_utils
Users that are interested in py_protein_utils are comparing it to the libraries listed below
Sorting:
- Protein common interface databases☆10Updated 6 years ago
- Protein-protein binding affinity benchmark☆15Updated 5 months ago
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 7 years ago
- ☆14Updated 5 years ago
- Structural space exploration of AlphaFold DB☆12Updated 3 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Updated 6 years ago
- ☆17Updated last year
- ☆29Updated 5 years ago
- ☆13Updated 5 years ago
- ☆30Updated 2 months ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 2 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 6 years ago
- Code for our paper "Protein sequence design with a learned potential"☆34Updated 3 years ago
- ☆13Updated 7 years ago
- Physical energy function for protein sequence design☆31Updated 2 years ago
- ☆18Updated 4 months ago
- Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)☆10Updated 4 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆35Updated 4 years ago
- a protein descriptor for site prediction☆16Updated 5 years ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆10Updated 4 years ago
- ☆9Updated 2 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Updated 6 years ago
- Python Toolbox For Rosetta Silent Files Processing☆16Updated 6 years ago
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆29Updated 7 years ago
- ☆19Updated last year
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 4 years ago
- Spatiotemporal identification of druggable binding sites using deep learning☆22Updated 4 years ago
- MEGADOCK on Google Colaboratory☆17Updated last year