decarboxy / py_protein_utilsLinks
Python utilities for handling Rosetta output and PDB files
☆16Updated 13 years ago
Alternatives and similar repositories for py_protein_utils
Users that are interested in py_protein_utils are comparing it to the libraries listed below
Sorting:
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 7 years ago
- ☆30Updated 4 months ago
- Protein-protein binding affinity benchmark☆15Updated 7 months ago
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- Protein common interface databases☆10Updated 6 years ago
- a protein descriptor for site prediction☆16Updated 6 years ago
- Generate Ramachandran plots for single PDB structure and as heatmap for MD trajectory☆10Updated 3 years ago
- ☆15Updated 5 years ago
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆29Updated 7 years ago
- to assess structural quality of RNA using 3D CNN☆13Updated 7 years ago
- Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)☆10Updated 5 years ago
- ☆13Updated 5 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 2 years ago
- PCA and normal mode analysis of proteins☆18Updated last year
- ☆23Updated 4 years ago
- Protein-Protein Docking using Genetic Algorithm☆17Updated last year
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36Updated 4 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆37Updated 4 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Updated 6 years ago
- ☆18Updated last year
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Updated 6 months ago
- ☆13Updated 7 years ago
- Personal Notes☆23Updated 2 months ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- Code for our paper "Protein sequence design with a learned potential"☆34Updated 4 years ago
- Flexible Artificial Intelligence Docking☆17Updated 3 weeks ago
- A unified and modular interface to homology modelling software☆11Updated last year
- Structural space exploration of AlphaFold DB☆12Updated 3 years ago
- ☆29Updated 5 years ago