ykurumida / ab-predictorLinks
test
☆14Updated 4 years ago
Alternatives and similar repositories for ab-predictor
Users that are interested in ab-predictor are comparing it to the libraries listed below
Sorting:
- This repo contains the collection of codes to find designer interfacial mutations☆17Updated 2 years ago
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆28Updated 3 years ago
- A structure checker in python☆23Updated 11 months ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- Differentiable Pairing using Alignment-based Language Models☆24Updated last year
- ☆13Updated 8 years ago
- ☆21Updated last year
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- ☆35Updated 4 years ago
- ☆20Updated 3 years ago
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- dMaSIF implementation for google colab☆34Updated 2 years ago
- Tool for modelling the CDRs of antibodies☆32Updated 3 years ago
- ZDOCK predictions and PDB structures in C++ and Python☆12Updated last year
- ☆35Updated 2 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- Protein-protein binding affinity benchmark☆16Updated 8 months ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 7 months ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆26Updated last year
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- ☆15Updated last year
- ☆27Updated 3 weeks ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated last week
- ☆25Updated 2 months ago
- Some scripts that I keep using over and over.☆20Updated 4 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆38Updated 4 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆28Updated last year
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆30Updated 3 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 5 months ago