Alternatives and similar repositories for ab-predictor

Users that are interested in ab-predictor are comparing it to the libraries listed below

• Lailabcode / DeepSCM
  A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…
  ☆26Updated 2 years ago
• liedllab / TopModel
  A structure checker in python
  ☆20Updated 6 months ago
• pepamengual / UEP
  ☆9Updated 2 years ago
• weng-lab / libzdock
  ZDOCK predictions and PDB structures in C++ and Python
  ☆13Updated last year
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆42Updated 2 years ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 4 years ago
• CSB-KaracaLab / prot-on
  This repo contains the collection of codes to find designer interfacial mutations
  ☆17Updated last year
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆30Updated 2 years ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆31Updated 2 months ago
• AmeyaHarmalkar / therML
  The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability
  ☆7Updated last year
• Nucleus2014 / protease-gcnn-pytorch
  ☆19Updated last year
• brennanaba / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆32Updated 2 years ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 5 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆26Updated 3 weeks ago
• ohuelab / ColabDesign-cyclic-binder
  ☆32Updated last year
• JosePereiraUA / rosetta-scripts
  Some Rosetta Scripts that allow for various simple tasks
  ☆14Updated 5 years ago
• ProteinDesignLab / IgVAE
  A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.
  ☆28Updated 2 years ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 2 years ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆32Updated 2 years ago
• strauchlab / iNNterfaceDesign
  ☆19Updated 2 years ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆48Updated 2 weeks ago
• aaronkollasch / seqdesign-pytorch
  Protein design and variant prediction using autoregressive generative models
  ☆23Updated 2 years ago
• bwicky / oligomer_hallucination
  ☆35Updated last year
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated last year
• Furman-Lab / PatchMAN
  ☆26Updated 3 weeks ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆53Updated 3 years ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆34Updated 2 months ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 10 months ago
• Hoecker-Lab / protlego
  Automated construction of protein chimeras and their analysis.
  ☆14Updated last year