ykurumida / ab-predictorLinks
test
☆14Updated 4 years ago
Alternatives and similar repositories for ab-predictor
Users that are interested in ab-predictor are comparing it to the libraries listed below
Sorting:
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆28Updated 3 years ago
- A structure checker in python☆22Updated 10 months ago
- ZDOCK predictions and PDB structures in C++ and Python☆12Updated last year
- ☆21Updated last year
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆30Updated 3 years ago
- Differentiable Pairing using Alignment-based Language Models☆24Updated last year
- Physical energy function for protein sequence design☆33Updated 2 years ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated 2 weeks ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago
- ☆35Updated 3 years ago
- This repo contains the collection of codes to find designer interfacial mutations☆17Updated 2 years ago
- ☆21Updated 2 years ago
- ☆20Updated 3 years ago
- Tool for modelling the CDRs of antibodies☆32Updated 2 years ago
- ☆35Updated 2 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆55Updated 4 months ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- Structural Quality Assessment for Biomolecular Structure Prediction Models☆53Updated last week
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆50Updated 3 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Scores for Hydrophobicity and Charges based on SASAs☆37Updated 4 months ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆29Updated last month
- ☆29Updated 5 years ago
- Structure prediction of alternative protein conformations☆79Updated 7 months ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆27Updated last year
- Repo contains source code of the SurfaceID paper☆24Updated last year
- Fast, accurate, and deterministic protein side-chain packing☆36Updated 7 months ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆25Updated last year
- Protein-protein binding affinity benchmark☆16Updated 8 months ago