Alternatives and similar repositories for ab-predictor:

Users that are interested in ab-predictor are comparing it to the libraries listed below

• pepamengual / UEP
  ☆9Updated last year
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated last month
• liedllab / TopModel
  A structure checker in python
  ☆19Updated 2 months ago
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆22Updated last year
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆24Updated 7 months ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated 11 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆31Updated last year
• strauchlab / iNNterfaceDesign
  ☆19Updated 2 years ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆20Updated last year
• csi-greifflab / developability_profiling
  ☆20Updated last month
• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 3 years ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 7 months ago
• CSB-KaracaLab / prot-on
  This repo contains the collection of codes to find designer interfacial mutations
  ☆16Updated last year
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆39Updated last year
• Lailabcode / DeepSCM
  A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…
  ☆22Updated 2 years ago
• LPDI-EPFL / FunFolDesData
  Rosetta FunFolDes – a general framework for the computational design of functional proteins.
  ☆19Updated 5 years ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆32Updated 8 months ago
• Furman-Lab / PatchMAN
  ☆25Updated 6 months ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆27Updated last month
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆41Updated 2 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆21Updated last year
• tommyhuangthu / EvoEF2
  a fast and accurate physical energy function extended from EvoEF for protein sequence design
  ☆25Updated last year
• bwicky / oligomer_hallucination
  ☆36Updated last year
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆24Updated 5 months ago
• JosePereiraUA / rosetta-scripts
  Some Rosetta Scripts that allow for various simple tasks
  ☆13Updated 5 years ago
• PKUliujl / GeoSeqBuilder
  ☆25Updated 2 weeks ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆32Updated 9 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆26Updated 10 months ago
• sokrypton / roscon2024
  Tutorial files
  ☆11Updated 6 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago