Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
☆33Sep 22, 2017Updated 9 years ago
Alternatives and similar repositories for integrate
Users that are interested in integrate are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Hetionet: an integrative network of disease☆363Apr 3, 2023Updated 3 years ago
- Hetnets in Python (relocated from dhimmel/hetio)☆103Sep 4, 2025Updated last year
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 8 years ago
- Dimensionality reduction and batch integration methods for single cell data☆17Feb 9, 2023Updated 3 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆13Jan 12, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- OHMI: The Ontology of Host-Microbiome Interactions☆12May 14, 2026Updated 4 months ago
- A web app that uses machine learning to recommend the most suitable journals based on the text content of your preprint☆22May 23, 2023Updated 3 years ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Jan 23, 2023Updated 3 years ago
- Python package for access to online biomedical resources, usually via REST APIs.☆22Updated this week
- THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build☆17Feb 5, 2021Updated 5 years ago
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated 3 months ago
- Build PharMeBINet from different sources.☆24Oct 5, 2026Updated last week
- BioDWH2 is an easy-to-use, automated, graph-based data warehouse and mapping tool for bioinformatics and medical informatics.☆20Aug 7, 2026Updated 2 months ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Ideas, code and results of the 2018 CytoData hackathon☆13Jan 23, 2024Updated 2 years ago
- 3D hotspot mutation proximity analysis tool☆53Mar 31, 2023Updated 3 years ago
- Python xml.sax☆10Mar 19, 2019Updated 7 years ago
- PIA - Protein Inference Algorithms☆26Aug 13, 2026Updated last month
- Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs☆11Dec 21, 2019Updated 6 years ago
- ☆10Nov 12, 2023Updated 2 years ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆19Mar 7, 2020Updated 6 years ago
- Exploring retrieval systems for language models☆14Aug 7, 2026Updated 2 months ago
- Image-based Profiling Handbook☆11Sep 18, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- User-friendly extensions to the Disease Ontology☆20Sep 9, 2016Updated 10 years ago
- SymPy based framework for optimized code generation for BSSN formulation of Einstein equation for heterogeneous platforms.☆11Sep 23, 2026Updated 2 weeks ago
- Shareable project for: Decomposing Oncogenic Transcriptional Signatures to Generate Maps of Divergent Cellular States☆10Nov 11, 2020Updated 5 years ago
- A multi-reference network annotation tool to support omics analysis☆12May 31, 2022Updated 4 years ago
- A Python package for gene network analysis☆33Jun 22, 2022Updated 4 years ago
- Port of the 'host' example in try-reflex to FLTKHS.☆12Aug 26, 2017Updated 9 years ago
- Misc. documents for the Bioinformatics Open Source Conference (BOSC), https://www.open-bio.org/events/bosc/☆13Apr 6, 2026Updated 6 months ago
- A collection of computational methods in science.☆12Jan 6, 2017Updated 9 years ago
- De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors☆22Nov 6, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Single Cell multimodal data scripts for downloading datasets☆20May 20, 2026Updated 4 months ago
- Servant client generators for the Python language☆17Mar 2, 2021Updated 5 years ago
- Statistical data visualization☆11Nov 26, 2016Updated 9 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated 2 years ago
- The Timeline Ontology is centered around the notion of timeline, seen here as a way to identify a temporal backbone. A timeline may suppo…☆17May 27, 2020Updated 6 years ago
- SMARTS: 'regular expressions' for chemical structures☆24Jun 21, 2018Updated 8 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆69Oct 2, 2026Updated last week