Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
☆33Sep 22, 2017Updated 8 years ago
Alternatives and similar repositories for integrate
Users that are interested in integrate are comparing it to the libraries listed below
Sorting:
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆26Jun 17, 2016Updated 9 years ago
- Processing high-throughput drug indication resources.☆19Mar 15, 2016Updated 9 years ago
- Hetionet: an integrative network of disease☆343Apr 3, 2023Updated 2 years ago
- Python package for access to online biomedical resources, usually via REST APIs.☆19Jan 16, 2026Updated last month
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- OHMI: The Ontology of Host-Microbiome Interactions☆12Dec 29, 2025Updated 2 months ago
- PKSmart: Predicting PK properties using Chemical Structures☆18Sep 26, 2025Updated 5 months ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Mar 1, 2019Updated 7 years ago
- ☆13Apr 17, 2020Updated 5 years ago
- Machine Learning predictions of cancer cell sensitivity to different drugs using data from CCLE (Cancer Cell Line Encyclopedia).☆15Feb 6, 2017Updated 9 years ago
- A stitching platform for InXight☆15Mar 28, 2025Updated 11 months ago
- BioDWH2 is an easy-to-use, automated, graph-based data warehouse and mapping tool for bioinformatics and medical informatics.☆18Nov 21, 2025Updated 3 months ago
- Use machine learning to find patterns of similar eligibility protocol criteria for clinical trials☆19Jan 9, 2019Updated 7 years ago
- Build PharMeBINet from different sources.☆20Jan 15, 2026Updated last month
- ComptoxAI - An artificial Intelligence toolkit for computational toxicology☆17Apr 15, 2025Updated 10 months ago
- A Python package for gene network analysis☆32Jun 22, 2022Updated 3 years ago
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆20Nov 19, 2024Updated last year
- Application for hosting gene expression and ontology data with Shiny☆17Jan 8, 2018Updated 8 years ago
- A lightweight framework to enable hierarchical, heterogeneous dynamical systems co-integration. Batteries included!☆22Jan 19, 2026Updated last month
- Single Cell multimodal data scripts for downloading datasets☆18Nov 17, 2025Updated 3 months ago
- Communitiy-based Cell Line Ontology☆18Feb 21, 2026Updated last week
- MyGene.info: A BioThings API for gene annotations☆131Feb 12, 2026Updated 2 weeks ago
- User-friendly extensions to the Disease Ontology☆20Sep 9, 2016Updated 9 years ago
- PIA - Protein Inference Algorithms☆25Updated this week
- Target prediction multitask neural network, with examples running it in Python, C++, Julia and JS☆20Sep 20, 2025Updated 5 months ago
- 3D hotspot mutation proximity analysis tool☆52Mar 31, 2023Updated 2 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Mar 24, 2021Updated 4 years ago
- Downloader, preprocessor, parser and deduper for NIH and NSF grants☆22Aug 24, 2018Updated 7 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆60May 16, 2025Updated 9 months ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Feb 23, 2026Updated last week
- RNA-Seq pipeline☆35Jul 22, 2015Updated 10 years ago
- ☆58Nov 15, 2020Updated 5 years ago
- create word cloud using the abstract from PubMed☆22Feb 28, 2019Updated 7 years ago
- Destiny 2 weapon rolls for DIM☆12Feb 23, 2026Updated last week
- Open Drug Metabolism & PharmacoKinetics (OpenDMPK) is an open source data resource and toolkit for predicting drug metabolism and pharmac…☆26Dec 31, 2021Updated 4 years ago
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆27Jan 2, 2022Updated 4 years ago
- Learning Algebraic Varieties from Samples☆24Jan 5, 2024Updated 2 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆34Oct 12, 2018Updated 7 years ago