typedb-osi / typedb-bioLinks
TypeDB Bio: Biomedical Knowledge Graph
☆85Updated last month
Alternatives and similar repositories for typedb-bio
Users that are interested in typedb-bio are comparing it to the libraries listed below
Sorting:
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆192Updated last year
- KGX is a Python library for exchanging Knowledge Graphs☆129Updated 2 weeks ago
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆70Updated last week
- BioGrakn Knowledge Graph☆184Updated 4 years ago
- Schema and generated objects for biolink data model and upper ontology☆199Updated this week
- Hetnets in Python (relocated from dhimmel/hetio)☆96Updated last year
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆56Updated last week
- Grounding of biomedical named entities with contextual disambiguation☆45Updated 2 months ago
- ☆130Updated 2 years ago
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆82Updated last year
- OntoBrowser is a web-based application for managing ontologies☆42Updated 2 years ago
- NetworkX-based Python library for representing ontologies☆90Updated 2 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- Integrated OBO ontology store☆47Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated 3 weeks ago
- Hetionet: an integrative network of disease☆292Updated 2 years ago
- mOWL: Machine Learning library with Ontologies☆68Updated 5 months ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆146Updated last month
- python library for working with ontologies and ontology associations☆129Updated 5 months ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆41Updated last year
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆44Updated 2 weeks ago
- A Knowledge Graph for Relational Learning On Biological Data☆101Updated last year
- ☆24Updated 4 years ago
- Software "Disease_ontologies_for_knowledge_graphs" - a knowledge base solution that uses Grakn core and disease ontologies cross-referenc…☆21Updated 4 years ago
- OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.☆97Updated last year
- Scripts that Bio2RDF users have created to generate RDF versions of scientific datasets☆134Updated 3 years ago
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆36Updated this week
- Build PharMeBINet from different sources.☆18Updated this week
- A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…☆17Updated 2 weeks ago