TypeDB Bio: Biomedical Knowledge Graph
☆88Jun 2, 2025Updated 9 months ago
Alternatives and similar repositories for typedb-bio
Users that are interested in typedb-bio are comparing it to the libraries listed below
Sorting:
- TypeDB Loader - Data Migration Tool for TypeDB☆64Mar 15, 2024Updated last year
- BioGrakn Knowledge Graph☆185Jan 15, 2021Updated 5 years ago
- Create Grakn Databases with ease☆16Feb 1, 2021Updated 5 years ago
- TypeDB Driver Example Projects and Tutorials☆86Oct 14, 2025Updated 4 months ago
- TypeQL plugin for Visual Studio Code☆18Oct 30, 2025Updated 4 months ago
- ☆16Jun 17, 2024Updated last year
- Elixir client for Grakn database☆15Jan 24, 2025Updated last year
- TypeQL: Built for systems, not records☆245Feb 27, 2026Updated last week
- A curated list of awesome TypeDB frameworks libraries, software and resources.☆74Nov 26, 2025Updated 3 months ago
- TypeDB Studio: An interactive visual environment for TypeDB☆222Feb 20, 2026Updated 2 weeks ago
- BioELECTRA☆50Oct 27, 2021Updated 4 years ago
- A client interface to read from and write to the TypeDB Knowledge Graph☆53Mar 30, 2022Updated 3 years ago
- ☆18Jun 14, 2024Updated last year
- TypeDB-ML is the Machine Learning integrations library for TypeDB☆553Nov 18, 2023Updated 2 years ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆158May 3, 2024Updated last year
- Transform the OMOP model to graph model☆27Dec 13, 2024Updated last year
- Automorphism groups for CSets - generalizing the nauty algorithm to a broad class of data structures☆14Oct 30, 2023Updated 2 years ago
- A streamlit app that uses fbprophet for forecasting COVID☆10Dec 8, 2022Updated 3 years ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Jun 10, 2024Updated last year
- The unique data management platform for Julia☆16Apr 25, 2022Updated 3 years ago
- Code for "Incorporating Relevance Feedback for Information-Seeking Retrieval using Few-Shot Document Re-Ranking" (https://arxiv.org/abs/2…☆14Feb 2, 2026Updated last month
- variant integration methods for the 1000 Genomes Project☆21Jan 16, 2018Updated 8 years ago
- Curated list of resources for variant prioritization☆14Nov 18, 2025Updated 3 months ago
- ☆17Aug 12, 2025Updated 6 months ago
- Hetionet: an integrative network of disease☆344Apr 3, 2023Updated 2 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Feb 11, 2026Updated 3 weeks ago
- Source code and data files for manuscript titled "Pharmaceutical patent landscaping: A novel approach to understand patents from the drug…☆14Nov 27, 2023Updated 2 years ago
- Subclassification of disease states based on the intersection of literature and expression☆12Jan 15, 2019Updated 7 years ago
- TypeDB Drivers for Rust, Python, Java, Node.js, C, C++, and C#.☆57Feb 28, 2026Updated last week
- TypeDB Driver for Rust☆13Sep 27, 2023Updated 2 years ago
- TypeDB: Built for systems, not records☆4,231Updated this week
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆200May 3, 2024Updated last year
- reference free variant assembly☆34Jul 14, 2023Updated 2 years ago
- The Clinical Trials Knowledge Graph☆67Mar 9, 2023Updated 3 years ago
- Code and supplementary material for the HealthINF conference paper☆13Jan 19, 2021Updated 5 years ago
- Configuration and definitions of Airflow for OpenTrials☆18Jul 21, 2017Updated 8 years ago
- The Baseline Site Selection Tool implements simulation tools for clinical trial enrollment.☆18Sep 8, 2022Updated 3 years ago
- API for linked biological knowledge☆66Apr 26, 2022Updated 3 years ago
- Use machine learning to find patterns of similar eligibility protocol criteria for clinical trials☆19Jan 9, 2019Updated 7 years ago