bio2rdf / bio2rdf-scriptsLinks
Scripts that Bio2RDF users have created to generate RDF versions of scientific datasets
β134Updated 3 years ago
Alternatives and similar repositories for bio2rdf-scripts
Users that are interested in bio2rdf-scripts are comparing it to the libraries listed below
Sorting:
- β16Updated 11 months ago
- π A Python package for using ontologies, terminologies, and biomedical nomenclaturesβ69Updated this week
- Ontology Tutorialβ72Updated 2 years ago
- Github repo for the Experimental Factor Ontology (EFO)β56Updated 3 weeks ago
- KGX is a Python library for exchanging Knowledge Graphsβ127Updated last week
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cβ¦β50Updated last month
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.β81Updated last year
- A Knowledge Graph for Relational Learning On Biological Dataβ99Updated last year
- python library for working with ontologies and ontology associationsβ129Updated 3 months ago
- Ontology for representing scientific evidence and provenance informationβ50Updated 10 months ago
- Ontology Lookup Service from SPOT at EBIβ98Updated 2 years ago
- Integrated OBO ontology storeβ46Updated 3 weeks ago
- Turning Ontologies Plus Annotation Properties into Vectorsβ35Updated 4 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://giβ¦β45Updated 2 years ago
- πΊοΈ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaβ¦β54Updated last month
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)β59Updated 6 years ago
- β130Updated 2 years ago
- TypeDB Bio: Biomedical Knowledge Graphβ86Updated 11 months ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. Thisβ¦β86Updated 9 months ago
- The Semanticscience Integrated Ontology (SIO) provides a simple, integrated ontology of types and relations for rich description of objecβ¦β63Updated last year
- RO is an ontology of relations for use with biological ontologiesβ95Updated last week
- mOWL: Machine Learning library with Ontologiesβ67Updated 4 months ago
- A system for managing OBO PURLsβ83Updated 2 weeks ago
- The Ontology for Biomedical Investigationsβ82Updated this week
- Hetnets in Python (relocated from dhimmel/hetio)β95Updated last year
- Ontology cross-reference and mapping serviceβ19Updated last month
- Medical action ontologyβ56Updated this week
- A simple system for specifying OWL class design patterns for OBO-ish ontologies.β44Updated 3 years ago
- Schema and generated objects for biolink data model and upper ontologyβ198Updated last week
- New repository for managing the source for the human disease ontologyβ15Updated 9 years ago