Scripts that Bio2RDF users have created to generate RDF versions of scientific datasets
โ135Sep 20, 2021Updated 4 years ago
Alternatives and similar repositories for bio2rdf-scripts
Users that are interested in bio2rdf-scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- โ16Sep 5, 2023Updated 2 years ago
- ๐ฎ๐ A package to help serve predictions of biomedical concepts associations as Translator Reasoner APIโ12Feb 25, 2025Updated last year
- โ16Jun 17, 2024Updated last year
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"โ93Feb 11, 2021Updated 5 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and heaโฆโ56Aug 26, 2018Updated 7 years ago
- Virtual machines for every use case on DigitalOcean โข AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Crowd Based Coding and Harmonization using Linked Dataโ11Jan 22, 2018Updated 8 years ago
- Sgvizler: SPARQL result set visualisation javascript libraryโ32Oct 13, 2022Updated 3 years ago
- Lightweight Linked Data Browserโ38Aug 17, 2021Updated 4 years ago
- Files and documentation for the PhUSE Project "Going Translational with Linked Data"โ21Apr 10, 2020Updated 6 years ago
- Implementation of W3C's R2RML and Direct Mapping specificationsโ10Oct 12, 2020Updated 5 years ago
- The Potential Drug-drug Interaction and Potential Drug-drug Interaction Evidence Ontology (DIDEO)โ15Oct 25, 2023Updated 2 years ago
- Epimorphics implementation of the Linked Data APIโ55Apr 10, 2026Updated 3 weeks ago
- Java library for nanopublications based on RDF4Jโ31Apr 24, 2026Updated last week
- Rebuild of AskOmicsโ14Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.โ84Aug 3, 2023Updated 2 years ago
- Virtuoso Docker imageโ49Apr 12, 2023Updated 3 years ago
- A Parboiled2 based Parser for the W3C RDF 1.1 TriG-, Turtle-, N-Triples- and Quad-Languages for Scala, Java and JavaScriptโ10Sep 5, 2017Updated 8 years ago
- The Semanticscience Integrated Ontology (SIO) provides a simple, integrated ontology of types and relations for rich description of objecโฆโ69Updated this week
- A web client to browse and publish nanopublications.โ35Apr 24, 2026Updated last week
- KGX is a Python library for exchanging Knowledge Graphsโ140Apr 14, 2026Updated 3 weeks ago
- A knowledge graph and a set of tools for drug repurposingโ681Apr 19, 2022Updated 4 years ago
- A repo that contains outgoing links from DBpediaโ49Jun 5, 2020Updated 5 years ago
- Server application for publishing Geographic Linked Open Datasets via Web Feature Services.โ13Jun 3, 2024Updated last year
- Virtual machines for every use case on DigitalOcean โข AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An extension to Google Refine that enables graphical mapping of Google Refine project data to an RDF skeleton and then exporting it in RDโฆโ97Nov 13, 2023Updated 2 years ago
- ๐ Python Implementation and Extension of RDF2Vecโ267Mar 23, 2026Updated last month
- The OpenAPI Specification Repositoryโ12Jul 12, 2023Updated 2 years ago
- A Knowledge Graph for Relational Learning On Biological Dataโ109Mar 21, 2024Updated 2 years ago
- Semantic Web databaseโ19Sep 1, 2022Updated 3 years ago
- LargeRDFBench: A Billion Triples Benchmark for SPARQL Query Federationโ25Jun 19, 2023Updated 2 years ago
- Integrated CSV to RDF converter, using CSVW and nanopublicationsโ47May 6, 2024Updated last year
- Implementation of the xR2RML mapping language and SPARQL-to-MongoDB prototypeโ25Jul 2, 2025Updated 10 months ago
- A Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.โ17Jul 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways โข AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Scala DSL for programming with the OWL API.โ61Jul 10, 2024Updated last year
- Automatically exported from code.google.com/p/linked-data-apiโ58Jun 10, 2019Updated 6 years ago
- A scraper for bioRxivโ12Apr 12, 2023Updated 3 years ago
- DEPRECATED. See askomics/flaskomicsโ21Jan 16, 2020Updated 6 years ago
- Linked Open Data Inspectorโ13Aug 20, 2025Updated 8 months ago
- Hetionet: an integrative network of diseaseโ353Apr 3, 2023Updated 3 years ago
- AAAI-23 paper: Context-aware Safe Medication Recommendations with Molecular Graph and DDI Graph Embeddingโ19Nov 11, 2025Updated 5 months ago