RTXteam / RTX-KG2
Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
☆39Updated 3 weeks ago
Alternatives and similar repositories for RTX-KG2:
Users that are interested in RTX-KG2 are comparing it to the libraries listed below
- The Clinical Trials Knowledge Graph☆53Updated last year
- Unified Clinical Vocabulary Embeddings for Advancing Precision Medicine☆42Updated 3 weeks ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆175Updated 8 months ago
- ☆17Updated 2 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆35Updated 9 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆57Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆39Updated 2 months ago
- ☆55Updated 4 years ago
- Build PharMeBINet from different sources.☆13Updated this week
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆32Updated 5 months ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆19Updated 3 months ago
- 🪝 What's the latest version for each database?☆27Updated this week
- ☆64Updated 2 years ago
- Software "Disease_ontologies_for_knowledge_graphs" - a knowledge base solution that uses Grakn core and disease ontologies cross-referenc…☆21Updated 3 years ago
- AIONER☆47Updated 5 months ago
- A Knowledge Graph for Relational Learning On Biological Data☆87Updated 9 months ago
- ☆65Updated last year
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- code for Gogleva et al manuscript☆45Updated 2 years ago
- ☆127Updated last year
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆49Updated 4 months ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- A Standard Database for Drug Repositioning☆18Updated 7 years ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆51Updated this week
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆61Updated this week
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 3 years ago
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆33Updated 3 weeks ago
- Template for creating a BioCypher-driven knowledge graph☆11Updated last month
- A resource of adverse drug effects extracted from FDA structured product labels☆64Updated last month
- LLM-driven curation assist tool☆74Updated last month