RTXteam / RTX-KG2Links
Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
☆42Updated this week
Alternatives and similar repositories for RTX-KG2
Users that are interested in RTX-KG2 are comparing it to the libraries listed below
Sorting:
- Build PharMeBINet from different sources.☆17Updated 2 months ago
- The Clinical Trials Knowledge Graph☆57Updated 2 years ago
- ☆67Updated 3 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆192Updated last year
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆69Updated last week
- Grounding of biomedical named entities with contextual disambiguation☆44Updated last month
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆35Updated this week
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- ☆55Updated 4 years ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆55Updated this week
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆33Updated this week
- mOWL: Machine Learning library with Ontologies☆68Updated 4 months ago
- a tool for mapping free-text descriptions of entities to ontology terms☆20Updated 10 months ago
- UMLS Graph database for semantic queries☆22Updated 2 years ago
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆82Updated last year
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- NetworkX-based Python library for representing ontologies☆90Updated last year
- LLM-driven curation assist tool☆90Updated last week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆64Updated last month
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Updated 3 months ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology☆44Updated 3 years ago
- TypeDB Bio: Biomedical Knowledge Graph☆86Updated 3 weeks ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- a customzable pipeline for information extraction☆17Updated last month
- A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…☆17Updated last week
- 🪝 What's the latest version for each database?☆27Updated this week
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆59Updated last month