bio-ontology-research-group / multi-drug-embeddingLinks
Method for drug repurposing from knowledge graphs and literature
☆36Updated 5 years ago
Alternatives and similar repositories for multi-drug-embedding
Users that are interested in multi-drug-embedding are comparing it to the libraries listed below
Sorting:
- ☆58Updated 5 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- A Knowledge Graph for Relational Learning On Biological Data☆106Updated last year
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆28Updated last year
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- DeepGS: Deep Representation Learning of Graphs and Sequences for Drug-Target Binding Affinity Prediction (ECAI 2020)☆26Updated 5 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Updated this week
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Updated 5 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated 2 years ago
- Interpreting graph convolutional filters of target prediction network☆48Updated 6 years ago
- ☆17Updated 4 years ago
- ☆11Updated 5 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Updated 4 months ago
- A Graph Neural Network Model for prediction of the effectiveness of a drug on a given cancer cell lines☆17Updated 2 years ago
- Analysis notebooks and database interaction scripts for the nsides project☆19Updated last year
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 4 years ago
- NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions☆77Updated 4 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated 3 weeks ago
- Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"☆28Updated 5 years ago
- Simple analyses and tutorials on the COVID-19 Knowledge Graph☆14Updated 5 years ago
- ☆32Updated 6 years ago
- Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations☆32Updated 2 years ago
- ☆65Updated 6 years ago
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆96Updated 6 years ago
- ☆61Updated 6 years ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆88Updated last year
- Implementation of ReSimNet for drug response similarity prediction☆40Updated last year
- ☆71Updated 2 years ago
- Python package is for paper 'Predicting potential drug-drug interactions by integrating chemical, biological, phenotypic and network data…☆39Updated 9 years ago