mims-harvard / PrimeKG
Precision Medicine Knowledge Graph (PrimeKG)
☆537Updated 11 months ago
Alternatives and similar repositories for PrimeKG
Users that are interested in PrimeKG are comparing it to the libraries listed below
Sorting:
- Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…☆486Updated 2 years ago
- A curated list of biomedical knowledge graphs and of resources for their construction.☆45Updated 6 months ago
- TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design☆196Updated last year
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆226Updated last month
- A knowledge graph and a set of tools for drug repurposing☆630Updated 3 years ago
- Hetionet: an integrative network of disease☆285Updated 2 years ago
- A curated list of awesome healthcare taxonomies and knowledge graphs.☆71Updated last year
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆186Updated last year
- A Knowledge Graph for Relational Learning On Biological Data☆96Updated last year
- The Clinical Trials Knowledge Graph☆57Updated 2 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆186Updated last year
- ☆55Updated 4 years ago
- PyTorch Implementation of BioBERT☆327Updated last year
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆39Updated last week
- [KDD2024 ADS Track] RareBench: Can LLMs Serve as Rare Diseases Specialists?☆19Updated 5 months ago
- iBKH: The integrative Biomedical Knowledge Hub☆245Updated 6 months ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆151Updated last year
- User-friendly extensions of the DrugBank database☆187Updated 5 years ago
- benchmark dataset and Deep learning method (Hierarchical Interaction Network, HINT) for clinical trial approval probability prediction, p…☆121Updated 10 months ago
- Analysis notebooks and database interaction scripts for the nsides project☆19Updated 7 months ago
- PubMedQA: A Dataset for Biomedical Research Question Answering☆316Updated 2 years ago
- [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding☆147Updated 2 months ago
- AIONER☆54Updated 9 months ago
- PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development☆99Updated last year
- Code and data for TrialGPT.☆97Updated 3 months ago
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆54Updated 8 months ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆85Updated 9 months ago
- Medical Concept Annotation Tool☆489Updated this week
- ☆66Updated last year
- ☆26Updated 3 weeks ago