mims-harvard / PrimeKGLinks
Precision Medicine Knowledge Graph (PrimeKG)
☆555Updated last year
Alternatives and similar repositories for PrimeKG
Users that are interested in PrimeKG are comparing it to the libraries listed below
Sorting:
- Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…☆490Updated 2 years ago
- A curated list of biomedical knowledge graphs and of resources for their construction.☆48Updated 7 months ago
- A knowledge graph and a set of tools for drug repurposing☆636Updated 3 years ago
- Hetionet: an integrative network of disease☆287Updated 2 years ago
- TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design☆207Updated last year
- A curated list of awesome healthcare taxonomies and knowledge graphs.☆71Updated last year
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆229Updated last week
- A Knowledge Graph for Relational Learning On Biological Data☆99Updated last year
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆192Updated last year
- The Clinical Trials Knowledge Graph☆57Updated 2 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆188Updated last year
- PyTorch Implementation of BioBERT☆328Updated last year
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆151Updated last year
- iBKH: The integrative Biomedical Knowledge Hub☆245Updated 7 months ago
- [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding☆147Updated 2 months ago
- User-friendly extensions of the DrugBank database☆187Updated 6 years ago
- ☆55Updated 4 years ago
- PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development☆103Updated last year
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆41Updated last month
- [ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models☆276Updated 7 months ago
- [NeurIPS 2022] DRAGON 🐲: Deep Bidirectional Language-Knowledge Graph Pretraining☆324Updated 2 years ago
- A unifying framework for biomedical research knowledge graphs☆253Updated 2 weeks ago
- A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)☆1,041Updated 11 months ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆183Updated last year
- Biomedical Question Answering Datasets.☆110Updated last month
- ☆66Updated last year
- Analysis notebooks and database interaction scripts for the nsides project☆19Updated 8 months ago
- ☆58Updated 4 months ago
- benchmark dataset and Deep learning method (Hierarchical Interaction Network, HINT) for clinical trial approval probability prediction, p…☆122Updated 10 months ago
- Repository for the Human Disease Ontology.☆362Updated this week