Alternatives and similar repositories for PrimeKG:

Users that are interested in PrimeKG are comparing it to the libraries listed below

• MannLabs / CKG
  Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported f…
  ☆475Updated 2 years ago
• gnn4dr / DRKG
  A knowledge graph and a set of tools for drug repurposing
  ☆618Updated 2 years ago
• dmis-lab / BERN2
  BERN2: an advanced neural biomedical namedentity recognition and normalization tool
  ☆183Updated 11 months ago
• callahantiff / PheKnowLator
  PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
  ☆186Updated 10 months ago
• AstraZeneca / awesome-drug-discovery-knowledge-graphs
  A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…
  ☆222Updated last week
• robert-haas / awesome-biomedical-knowledge-graphs
  A curated list of biomedical knowledge graphs and of resources for their construction.
  ☆37Updated 5 months ago
• lujiaying / Awesome-HealthCare-KnowledgeBase
  A curated list of awesome healthcare taxonomies and knowledge graphs.
  ☆72Updated last year
• ninglab / CTKG
  The Clinical Trials Knowledge Graph
  ☆53Updated 2 years ago
• wcm-wanglab / iBKH
  iBKH: The integrative Biomedical Knowledge Hub
  ☆246Updated 5 months ago
• dmis-lab / biobert-pytorch
  PyTorch Implementation of BioBERT
  ☆318Updated last year
• mims-harvard / TxGNN
  TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design
  ☆183Updated 10 months ago
• dsi-bdi / biokg
  A Knowledge Graph for Relational Learning On Biological Data
  ☆94Updated last year
• MindRank-Biotech / PharmKG
  ☆55Updated 4 years ago
• OpenBioLink / OpenBioLink
  OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
  ☆149Updated 10 months ago
• RyanWangZf / PyTrial
  PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development
  ☆93Updated last year
• hetio / hetionet
  Hetionet: an integrative network of disease
  ☆278Updated last year
• ncbi / MedCPT
  Code for MedCPT, a model for zero-shot biomedical information retrieval.
  ☆169Updated last year
• RTXteam / RTX-KG2
  Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
  ☆40Updated this week
• DiseaseOntology / HumanDiseaseOntology
  Repository for the Human Disease Ontology.
  ☆357Updated last week
• bigscience-workshop / biomedical
  Tools for curating biomedical training data for large-scale language modeling
  ☆471Updated 3 months ago
• ncbi-nlp / BioWordVec
  ☆148Updated last year
• snap-stanford / multiscale-interactome
  ☆66Updated last year
• ncbi-nlp / TrialGPT
  Code and data for TrialGPT.
  ☆86Updated 2 months ago
• tatonetti-lab / nsides-release
  Analysis notebooks and database interaction scripts for the nsides project
  ☆19Updated 6 months ago
• uf-hobi-informatics-lab / GatorTron
  all scripts used in gatortron project
  ☆113Updated last year
• ncbi / AIONER
  AIONER
  ☆52Updated 8 months ago
• cambridgeltl / sapbert
  [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.
  ☆184Updated last year
• mims-harvard / SHEPHERD
  SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases
  ☆51Updated 6 months ago
• futianfan / clinical-trial-outcome-prediction
  benchmark dataset and Deep learning method (Hierarchical Interaction Network, HINT) for clinical trial approval probability prediction, p…
  ☆115Updated 8 months ago
• zjunlp / OntoProtein
  [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding
  ☆146Updated 2 weeks ago