๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
โ63Jun 13, 2026Updated last week
Alternatives and similar repositories for biomappings
Users that are interested in biomappings are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Grounding of biomedical named entities with contextual disambiguationโ53Jun 11, 2026Updated last week
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ144Updated this week
- Python toolkit for SSSOM mapping formatโ62Updated this week
- Integrated OBO ontology storeโ51Feb 13, 2026Updated 4 months ago
- ๐ช What's the latest version for each database?โ30Updated this week
- GPUs on demand by Runpod - Special Offer Available โข AdRun AI, ML, and HPC workloads on powerful cloud GPUsโwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Simple Standard for Sharing Ontology Mappingsโ202May 28, 2026Updated 3 weeks ago
- Mondo Disease Ontologyโ307Updated this week
- ๐ธ Idiomatic conversion between URIs and compact URIs (CURIEs) in Pythonโ27Updated this week
- Materialize OWL existential relationsโ23Mar 13, 2026Updated 3 months ago
- Network Embedding All the Thingsโ19Oct 4, 2022Updated 3 years ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubโ34Mar 19, 2024Updated 2 years ago
- source files for OBA (Ontology of Biological Attributes)โ31Updated this week
- Ontology for representing scientific evidence and provenance informationโ53Oct 2, 2025Updated 8 months ago
- ๐ก Unified access to OLS instances like from the EBI and TIBโ14Apr 20, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer โข AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ten quick tips to finish that manuscript that's 90% complete.โ13Mar 30, 2022Updated 4 years ago
- Github repo for the Experimental Factor Ontology (EFO)โ63Updated this week
- Ontology Access Kit: A python library and command line application for working with ontologiesโ176May 12, 2026Updated last month
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ76Jun 12, 2026Updated last week
- ๐ Easily pick a place to store data for your Python code.โ42Updated this week
- Schema and generated objects for biolink data model and upper ontologyโ244Jun 11, 2026Updated last week
- OBO Organized Knowledge: Training materials for becoming an OBO engineerโ122Jun 10, 2026Updated last week
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automaticallyโ42Apr 2, 2024Updated 2 years ago
- Repository for Apollo-SV ontology. Versioning Apollo-SV independently of the software was made easiest by having it as a separate reposiโฆโ11Apr 9, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient โข AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Python library (C++ backend) for degree-preserving network randomizationโ14Oct 14, 2019Updated 6 years ago
- Repository for representing genotypes and their association with phenotypesโ20Feb 2, 2026Updated 4 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.โ75Jun 3, 2026Updated 2 weeks ago
- a tool for mapping free-text descriptions of entities to ontology termsโ26Jul 30, 2024Updated last year
- Python package for matrix storage and operations on hetnetsโ14Mar 30, 2023Updated 3 years ago
- Modular environmental exposures ontologyโ38May 4, 2026Updated last month
- Harmonizing pathway databases using Biological Expression Language (BEL)โ20Jul 1, 2024Updated last year
- The Ontology for Biomedical Investigationsโ102Jun 8, 2026Updated last week
- โ15May 21, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer โข AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- KGX is a Python library for exchanging Knowledge Graphsโ141Updated this week
- The Ontology for Modeling and Representation of Social Entitiesโ21Jun 6, 2026Updated 2 weeks ago
- ๐ Generation and Applications of Knowledge Graphs in Systems and Networks Biologyโ33Dec 16, 2019Updated 6 years ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.โ14May 26, 2026Updated 3 weeks ago
- The previous version of the Monarch Initiative websiteโ17Jan 26, 2024Updated 2 years ago
- Data ingest application for Monarch Initiative knowledge graph using Kozaโ24Jun 11, 2026Updated last week
- Files for the Bioschemas website.โ20Jun 10, 2026Updated last week