๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
โ64Jul 16, 2026Updated 2 weeks ago
Alternatives and similar repositories for biomappings
Users that are interested in biomappings are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ๐ฃ๏ธ Semantic Mapping Reasoning Assembler (SeMRA): tooling for semantic mappingsโ15Jul 4, 2026Updated 3 weeks ago
- Grounding of biomedical named entities with contextual disambiguationโ54Jun 29, 2026Updated last month
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ146Updated this week
- A vocabulary about the processes, entities, and agents involved in the curation of semantic mappingsโ15Jun 10, 2026Updated last month
- Python toolkit for SSSOM mapping formatโ62Updated this week
- GPUs on demand by Runpod - Special Offer Available โข AdRun AI, ML, and HPC workloads on powerful cloud GPUsโwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ๐ธ Idiomatic conversion between URIs and compact URIs (CURIEs) in Pythonโ27Jul 3, 2026Updated 3 weeks ago
- Integrated OBO ontology storeโ51Jul 18, 2026Updated last week
- ๐ช What's the latest version for each database?โ30Updated this week
- Simple Standard for Sharing Ontology Mappingsโ206Updated this week
- Mondo Disease Ontologyโ310Updated this week
- Materialize OWL existential relationsโ23Mar 13, 2026Updated 4 months ago
- Network Embedding All the Thingsโ19Oct 4, 2022Updated 3 years ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubโ34Mar 19, 2024Updated 2 years ago
- Ontology for representing scientific evidence and provenance informationโ51Oct 2, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- source files for OBA (Ontology of Biological Attributes)โ30Updated this week
- Github repo for the Experimental Factor Ontology (EFO)โ64Jul 15, 2026Updated 2 weeks ago
- ๐ก Unified access to OLS instances like from the EBI and TIBโ14Apr 20, 2026Updated 3 months ago
- Ten quick tips to finish that manuscript that's 90% complete.โ13Mar 30, 2022Updated 4 years ago
- Ontology Access Kit: A python library and command line application for working with ontologiesโ186Jul 22, 2026Updated last week
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ75Jul 7, 2026Updated 3 weeks ago
- ๐ Easily pick a place to store data for your Python code.โ43Jul 4, 2026Updated 3 weeks ago
- Repository for Apollo-SV ontology. Versioning Apollo-SV independently of the software was made easiest by having it as a separate reposiโฆโ10Jul 24, 2026Updated last week
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automaticallyโ43Jun 19, 2026Updated last month
- Proton VPN Special Offer - Get 70% off โข AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Schema and generated objects for biolink data model and upper ontologyโ256Updated this week
- OBO Organized Knowledge: Training materials for becoming an OBO engineerโ122Jul 8, 2026Updated 3 weeks ago
- โ15May 21, 2026Updated 2 months ago
- Python library (C++ backend) for degree-preserving network randomizationโ14Oct 14, 2019Updated 6 years ago
- a tool for mapping free-text descriptions of entities to ontology termsโ26Jul 30, 2024Updated 2 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.โ76Jun 3, 2026Updated last month
- Repository for representing genotypes and their association with phenotypesโ19Feb 2, 2026Updated 5 months ago
- Python package for matrix storage and operations on hetnetsโ14Mar 30, 2023Updated 3 years ago
- Modular environmental exposures ontologyโ38Updated this week
- Managed Database hosting by DigitalOcean โข AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Harmonizing pathway databases using Biological Expression Language (BEL)โ20Jul 1, 2024Updated 2 years ago
- The Ontology for Modeling and Representation of Social Entitiesโ21Jul 11, 2026Updated 2 weeks ago
- The Ontology for Biomedical Investigationsโ103Updated this week
- a tool for mapping free-text descriptions of entities to ontology termsโ22Jun 25, 2026Updated last month
- Monarch agent tutorialโ15Apr 15, 2025Updated last year
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.โ14Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Modelโ25Jul 20, 2026Updated last week