๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
โ63Jun 13, 2026Updated 3 weeks ago
Alternatives and similar repositories for biomappings
Users that are interested in biomappings are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Grounding of biomedical named entities with contextual disambiguationโ54Jun 29, 2026Updated last week
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ145Updated this week
- Python toolkit for SSSOM mapping formatโ62Jun 29, 2026Updated last week
- Integrated OBO ontology storeโ51Jul 2, 2026Updated last week
- ๐ช What's the latest version for each database?โ30Updated this week
- Managed Database hosting by DigitalOcean โข AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Simple Standard for Sharing Ontology Mappingsโ205May 28, 2026Updated last month
- Mondo Disease Ontologyโ310Updated this week
- ๐ธ Idiomatic conversion between URIs and compact URIs (CURIEs) in Pythonโ27Jul 3, 2026Updated last week
- Materialize OWL existential relationsโ23Mar 13, 2026Updated 3 months ago
- Network Embedding All the Thingsโ19Oct 4, 2022Updated 3 years ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubโ34Mar 19, 2024Updated 2 years ago
- source files for OBA (Ontology of Biological Attributes)โ31Updated this week
- Ontology for representing scientific evidence and provenance informationโ53Oct 2, 2025Updated 9 months ago
- ๐ก Unified access to OLS instances like from the EBI and TIBโ14Apr 20, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI โข AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Ten quick tips to finish that manuscript that's 90% complete.โ13Mar 30, 2022Updated 4 years ago
- Github repo for the Experimental Factor Ontology (EFO)โ64Updated this week
- Ontology Access Kit: A python library and command line application for working with ontologiesโ181Jul 3, 2026Updated last week
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ76Updated this week
- ๐ Easily pick a place to store data for your Python code.โ42Jul 4, 2026Updated last week
- Schema and generated objects for biolink data model and upper ontologyโ254Jul 1, 2026Updated last week
- OBO Organized Knowledge: Training materials for becoming an OBO engineerโ122Updated this week
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automaticallyโ43Jun 19, 2026Updated 3 weeks ago
- Repository for Apollo-SV ontology. Versioning Apollo-SV independently of the software was made easiest by having it as a separate reposiโฆโ10Apr 9, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient โข AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Python library (C++ backend) for degree-preserving network randomizationโ14Oct 14, 2019Updated 6 years ago
- Repository for representing genotypes and their association with phenotypesโ20Feb 2, 2026Updated 5 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.โ76Jun 3, 2026Updated last month
- a tool for mapping free-text descriptions of entities to ontology termsโ26Jul 30, 2024Updated last year
- Python package for matrix storage and operations on hetnetsโ14Mar 30, 2023Updated 3 years ago
- Modular environmental exposures ontologyโ38Jul 2, 2026Updated last week
- Harmonizing pathway databases using Biological Expression Language (BEL)โ20Jul 1, 2024Updated 2 years ago
- The Ontology for Biomedical Investigationsโ103Jul 1, 2026Updated last week
- โ15May 21, 2026Updated last month
- Managed Database hosting by DigitalOcean โข AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- KGX is a Python library for exchanging Knowledge Graphsโ179Jun 17, 2026Updated 3 weeks ago
- The Ontology for Modeling and Representation of Social Entitiesโ21Updated this week
- ๐ Generation and Applications of Knowledge Graphs in Systems and Networks Biologyโ33Dec 16, 2019Updated 6 years ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.โ14Jun 23, 2026Updated 2 weeks ago
- The previous version of the Monarch Initiative websiteโ17Jan 26, 2024Updated 2 years ago
- Data ingest application for Monarch Initiative knowledge graph using Kozaโ24Updated this week
- Files for the Bioschemas website.โ20Updated this week