๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
โ62May 2, 2026Updated last week
Alternatives and similar repositories for biomappings
Users that are interested in biomappings are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Grounding of biomedical named entities with contextual disambiguationโ52Mar 30, 2026Updated last month
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ144Updated this week
- Python toolkit for SSSOM mapping formatโ62May 4, 2026Updated last week
- Integrated OBO ontology storeโ48Feb 13, 2026Updated 2 months ago
- ๐ช What's the latest version for each database?โ29Updated this week
- AI Agents on DigitalOcean Gradient AI Platform โข AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Simple Standard for Sharing Ontology Mappingsโ197Apr 29, 2026Updated last week
- Mondo Disease Ontologyโ300Updated this week
- ๐ธ Idiomatic conversion between URIs and compact URIs (CURIEs) in Pythonโ27Apr 29, 2026Updated last week
- Materialize OWL existential relationsโ22Mar 13, 2026Updated last month
- Network Embedding All the Thingsโ18Oct 4, 2022Updated 3 years ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubโ33Mar 19, 2024Updated 2 years ago
- source files for OBA (Ontology of Biological Attributes)โ29Jan 21, 2026Updated 3 months ago
- Ontology for representing scientific evidence and provenance informationโ53Oct 2, 2025Updated 7 months ago
- ๐ก Unified access to OLS instances like from the EBI and TIBโ13Apr 20, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean โข AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Ten quick tips to finish that manuscript that's 90% complete.โ13Mar 30, 2022Updated 4 years ago
- Github repo for the Experimental Factor Ontology (EFO)โ63May 1, 2026Updated last week
- Ontology Access Kit: A python library and command line application for working with ontologiesโ167Apr 13, 2026Updated 3 weeks ago
- ๐ A Python package for using ontologies, terminologies, and biomedical nomenclaturesโ77Updated this week
- ๐ Easily pick a place to store data for your Python code.โ42Apr 24, 2026Updated 2 weeks ago
- Schema and generated objects for biolink data model and upper ontologyโ235Apr 29, 2026Updated last week
- OBO Organized Knowledge: Training materials for becoming an OBO engineerโ120Apr 28, 2026Updated last week
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automaticallyโ41Apr 2, 2024Updated 2 years ago
- Repository for Apollo-SV ontology. Versioning Apollo-SV independently of the software was made easiest by having it as a separate reposiโฆโ11Apr 9, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python library (C++ backend) for degree-preserving network randomizationโ14Oct 14, 2019Updated 6 years ago
- Repository for representing genotypes and their association with phenotypesโ20Feb 2, 2026Updated 3 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.โ73Apr 13, 2026Updated 3 weeks ago
- a tool for mapping free-text descriptions of entities to ontology termsโ25Jul 30, 2024Updated last year
- Python package for matrix storage and operations on hetnetsโ14Mar 30, 2023Updated 3 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)โ20Jul 1, 2024Updated last year
- The Ontology for Biomedical Investigationsโ102Updated this week
- โ15Apr 8, 2026Updated last month
- KGX is a Python library for exchanging Knowledge Graphsโ140Apr 30, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways โข AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The Ontology for Modeling and Representation of Social Entitiesโ21Apr 28, 2026Updated last week
- ๐ Generation and Applications of Knowledge Graphs in Systems and Networks Biologyโ32Dec 16, 2019Updated 6 years ago
- The previous version of the Monarch Initiative websiteโ17Jan 26, 2024Updated 2 years ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.โ14Apr 27, 2026Updated 2 weeks ago
- Data ingest application for Monarch Initiative knowledge graph using Kozaโ24Updated this week
- Files for the Bioschemas website.โ20Updated this week
- Ontology lifecycle managementโ325Updated this week