📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
☆76Sep 11, 2026Updated last week
Alternatives and similar repositories for pyobo
Users that are interested in pyobo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆27Feb 21, 2025Updated last year
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆151Updated this week
- Registry of schemas that use LinkML☆19Jul 27, 2026Updated last month
- 🛣️ Semantic Mapping Reasoning Assembler (SeMRA): tooling for semantic mappings☆16Updated this week
- Summary Dashboard for Open Biological and Biomedical Ontologies☆24Jun 8, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Bayesian OWL ontology merging☆37Jun 4, 2025Updated last year
- ☆15Sep 1, 2026Updated 3 weeks ago
- Schema for chemistry ontology classes☆23Sep 17, 2026Updated last week
- Integrated OBO ontology store☆53Jul 18, 2026Updated 2 months ago
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆124Sep 10, 2026Updated 2 weeks ago
- 🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)☆139Jul 2, 2026Updated 2 months ago
- ☆10Updated this week
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆52Jul 16, 2026Updated 2 months ago
- The Ontology for Modeling and Representation of Social Entities☆21Sep 4, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevi…☆11Jul 25, 2025Updated last year
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆66Updated this week
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated 2 years ago
- Python toolkit for SSSOM mapping format☆64Updated this week
- Fission Yeast Phenotype Ontology☆16Sep 8, 2026Updated 2 weeks ago
- Faultless AST for Open Biomedical Ontologies in Python.☆34Feb 2, 2026Updated 7 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆43Jun 19, 2026Updated 3 months ago
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆57Feb 4, 2026Updated 7 months ago
- Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compo…☆51Apr 20, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Automated assistance for the schema development lifecycle☆67Aug 27, 2026Updated 3 weeks ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆200Sep 17, 2026Updated last week
- Grounding of biomedical named entities with contextual disambiguation☆56Jun 29, 2026Updated 2 months ago
- A system for managing OBO PURLs☆95Aug 27, 2026Updated 3 weeks ago
- 📖 A review of KGEM packages and frameworks at https://pykeen.github.io/kgem-software-review.☆12Jun 24, 2024Updated 2 years ago
- 📊 Results from the reproducibility and benchmarking studies presented in "Bringing Light Into the Dark: A Large-scale Evaluation of Know…☆36Apr 19, 2022Updated 4 years ago
- Repository for Apollo-SV ontology. Versioning Apollo-SV independently of the software was made easiest by having it as a separate reposi…☆10Aug 15, 2026Updated last month
- A knowledge extraction tool that uses a large language model to extract semantic information from text☆30Jan 3, 2023Updated 3 years ago
- Basic and Advanced OBO Graphs: specification and reference implementation☆74Mar 1, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 👜 Easily pick a place to store data for your Python code.☆43Updated this week
- OBO Metadata Ontology☆26Sep 15, 2026Updated last week
- 🪝 What's the latest version for each database?☆31Updated this week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆15May 19, 2026Updated 4 months ago
- RO is an ontology of relations for use with biological ontologies☆112Sep 7, 2026Updated 2 weeks ago
- Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes☆28Jan 14, 2026Updated 8 months ago
- SQL and SQLite builds of OWL ontologies☆69Updated this week