hetio / xswapLinks
Python library (C++ backend) for degree-preserving network randomization
☆14Updated 6 years ago
Alternatives and similar repositories for xswap
Users that are interested in xswap are comparing it to the libraries listed below
Sorting:
- Python package for matrix storage and operations on hetnets☆15Updated 2 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated last year
- 🪝 What's the latest version for each database?☆27Updated last week
- A project to capture biological pathway data from academic papers☆29Updated 7 months ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Updated 2 years ago
- Tools for building and manipulating graphs in Python☆43Updated last week
- Ten quick tips to finish that manuscript that's 90% complete.☆13Updated 3 years ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Updated 3 months ago
- PyBioPAX: A python implementation of the BioPAX object model☆24Updated last year
- Literature mining for T cell relations☆23Updated 3 years ago
- International BioHackathon Directory of Events, Projects and Communities☆12Updated 3 months ago
- Similarity search in heterogeneous knowledge graphs using meta paths.☆29Updated 2 years ago
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆19Updated 6 years ago
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆30Updated 3 years ago
- code for Gogleva et al manuscript☆46Updated 2 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Updated last year
- ☆26Updated 4 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Updated 2 years ago
- The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and …☆15Updated 9 years ago
- Tools for munging genomic data☆21Updated 6 years ago
- Benchmark agents on BioML tasks☆54Updated last month
- jinja2-enabled jupyter notebooks☆37Updated 3 weeks ago
- BioThings API framework - Making high-performance API for biological annotation data☆48Updated this week
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆35Updated last year
- Python package to query and analyse UniProt☆25Updated 5 years ago
- Code for the paper on t-SNE with variable degree of freedom☆12Updated 6 years ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated 2 weeks ago
- A flux balance analysis machine learning classifier for microbial GWAS☆14Updated 5 years ago
- biochem4j: integrated and extensible biochemical knowledge through graph databases☆12Updated 7 years ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 3 years ago