drtamermansour / nu-ngs01
NGS-1 Data analysis course
☆36Updated 3 years ago
Alternatives and similar repositories for nu-ngs01:
Users that are interested in nu-ngs01 are comparing it to the libraries listed below
- ☆15Updated 2 years ago
- ☆19Updated 4 years ago
- course about NGS data processing: genomics and transcriptomics☆33Updated 3 years ago
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆51Updated 4 months ago
- Bacterial Genome Assembly and Assessment☆23Updated 3 months ago
- ☆49Updated last year
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- Some useful python scripts for biologists☆32Updated 3 months ago
- List of genome assembly tools☆60Updated 2 weeks ago
- Various bioinformatics tutorials☆59Updated last year
- Variant Calling Pipeline Using GATK4 and Nextflow☆54Updated 2 years ago
- materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.☆46Updated 8 years ago
- my bin directory☆45Updated 4 months ago
- collection of bioinformatic scripts☆30Updated 10 months ago
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆14Updated this week
- A practical guide to build de-novo transcriptome assemblies for non-model organisms (described in Montero-Mendieta et al. 2017).☆27Updated 7 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆27Updated last year
- Various scripts that I have created that are useful for genome annotation (repeats & proteins)☆16Updated 3 years ago
- ☆37Updated last week
- Kraken output generates a report for each datasets, this script takes these individual output and combines it to one file, where each col…☆22Updated 7 months ago
- TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly☆27Updated 3 years ago
- Micro 612 genomics workshop☆37Updated 3 years ago
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆45Updated last month
- repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training☆58Updated this week
- ☆35Updated 2 years ago
- Hands-on workflow for learning metagenomics including DNA mapping, binning, QC and annotation. Answers and example code available in the…☆12Updated 2 years ago
- MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumin…☆42Updated 7 months ago
- Applied Python Programming for Life Scientists☆25Updated 3 years ago
- Intro to Shell for Bioinformatics - with STG examples☆28Updated 8 years ago
- A curated list of awesome curated lists of awesome softwares and resources in bioinformatics and affiliated areas☆39Updated 4 months ago