friedue / course_RNA-seq2019Links
☆35Updated 3 years ago
Alternatives and similar repositories for course_RNA-seq2019
Users that are interested in course_RNA-seq2019 are comparing it to the libraries listed below
Sorting:
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆36Updated 3 years ago
- A continually expanding collection of RNA-seq tools☆52Updated last week
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- A single cell sequencing read simulator.☆33Updated last year
- Accompanying analysis code for the FRASER manuscript☆26Updated 5 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆23Updated 3 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆29Updated 2 years ago
- documentation for trackViewer☆29Updated 6 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- RAGE-seq scripts☆18Updated 4 years ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 3 years ago
- Explore and download data from the recount3 project☆36Updated 3 weeks ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- Personal notes about work- and coding-related topics☆20Updated 2 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆31Updated last year
- ☆34Updated 6 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- Junction centric alternative splicing translator☆20Updated 2 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- ☆16Updated 8 years ago
- Epimap processing and analysis code repository☆33Updated 3 years ago
- ☆24Updated last year
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆34Updated 2 months ago