Alternatives and similar repositories for plinkbinr

Users that are interested in plinkbinr are comparing it to the libraries listed below

• MRCIEU / gwasglue2
  Connecting GWAS summary data to analytical tools
  ☆21Updated last year
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆37Updated 6 months ago
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆38Updated last year
• jean997 / cause
  R package for CAUSE
  ☆56Updated last year
• gqi / MRMix
  R package for performing Mendelian Randomization using mixture models
  ☆24Updated 5 years ago
• LizaDarrous / lhcMR
  lhcMR
  ☆26Updated last year
• cnfoley / mrclust
  R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.
  ☆17Updated 3 years ago
• jwr-git / pwcoco
  Pair-wise conditional analysis and colocalisation
  ☆40Updated last year
• mglev1n / ldscr
  LD Score Regression in R
  ☆48Updated last week
• globalbiobankmeta / multi-ancestry-pwmr
  Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper
  ☆18Updated last year
• RayDebashree / PLACO
  A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
  ☆34Updated 2 months ago
• LizaDarrous / PheWAS-cluster
  ☆20Updated last year
• rhhao / csMR
  Perform cell-stratified MR analysis through integrating GWAS and QTL data
  ☆32Updated last month
• WenjianBI / SPACox
  GWAS for survival analysis in large cohorts
  ☆21Updated last year
• jrs95 / hyprcoloc
  Hypothesis Prioritisation in multi-trait Colocalization
  ☆54Updated last year
• bar-woolf / TwoStepCisMR
  ☆13Updated 2 years ago
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆34Updated last year
• mglev1n / mrSampleOverlap
  Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies
  ☆11Updated 2 years ago
• adriaan-vd-graaf / mrlink2
  MR-link-2: pleiotropy robust cis MR
  ☆20Updated 3 weeks ago
• WSpiller / MVMR
  MVMR R Package
  ☆51Updated 2 weeks ago
• cnfoley / hyprcoloc
  R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
  ☆55Updated 4 years ago
• MRCIEU / MRInstruments
  Data objects for various sets of instruments
  ☆45Updated 5 years ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆28Updated last week
• genomicsITER / PFgenetics
  Collaborative genetic studies of idiopathic pulmonary fibrosis
  ☆17Updated 6 months ago
• alhenry / cvd1-hf
  Analysis code for Olink CVD1 - HF analysis
  ☆13Updated last year
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆30Updated 10 months ago
• ACDBio / AutoMR
  An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…
  ☆33Updated 2 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆32Updated last year
• fernandam93 / epiclocks_cancer
  This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendeli…
  ☆14Updated 3 years ago
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆24Updated 3 years ago