JingHuangLab / EViSLinks
EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarity
☆14Updated 4 years ago
Alternatives and similar repositories for EViS
Users that are interested in EViS are comparing it to the libraries listed below
Sorting:
- SIEVE-Score: interaction energy-based virtual screening method based on random forest.☆14Updated 2 years ago
- A repository of the analysis and simulation tools for biomolecular modeling, simulations and drug discovery☆13Updated 9 months ago
- Optimization of binding affinities in chemical space for drug discovery☆35Updated 2 years ago
- WaterDock-2.0 implementation with Akshay Sridhar☆21Updated 2 years ago
- ☆26Updated last year
- A versatile workflow for the generation of receptor-based pharmacophore models for virtual screening☆31Updated 7 months ago
- Energy minimization post-processing used in PoseBusters☆14Updated 8 months ago
- ☆21Updated last year
- MSMD (mixed-solvent molecular dynamics) engine and analysis tools☆19Updated 8 months ago
- Cryptic pocket prediction using AlphaFold 2☆24Updated 3 years ago
- Protein surface topographical mapping tool☆28Updated 2 years ago
- ☆12Updated 2 years ago
- ☆27Updated 2 years ago
- ProCare: A Point Cloud Registration Approach to Align Protein Cavities☆30Updated 2 years ago
- Small molecules discovery with different active deep learning strategies. Codebase for the paper: "Traversing chemical space with active …☆28Updated last year
- DeepCoSI: a Structure-based Deep Graph Learning Network Method for Covalent Binding Site Identification.☆14Updated 2 years ago
- ☆22Updated 2 years ago
- ☆53Updated 7 months ago
- ☆12Updated last year
- Automatic extraction of interacting compound-target pairs from ChEMBL.☆20Updated 3 months ago
- FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook☆18Updated 2 years ago
- Benchmarking active learning protocols for ligand binding affinity prediction☆12Updated last year
- SE(3)-equivariant point cloud networks for virtual screening☆11Updated 3 years ago
- Learning Protein-Ligand Properties with Atomic Environment Vectors☆10Updated last year
- Scaffold decoration and fragment linking with chemical language models and RL☆26Updated 9 months ago
- Kinome-wide structural pocket similarity☆10Updated 3 years ago
- ACGCN: Graph Convolutional Networks for Activity Cliff Prediction Between Matched Molecular Pairs (Park et al., 2022)☆19Updated 2 years ago
- ☆25Updated 10 months ago
- AI/ML Based QSAR Modeling and Translation to Deployable QSAR WebApps☆18Updated 2 months ago
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Updated last year