Zhaonan99 / Antibody-antigen-complex-structure-benchmark-datasetLinks
☆11Updated last year
Alternatives and similar repositories for Antibody-antigen-complex-structure-benchmark-dataset
Users that are interested in Antibody-antigen-complex-structure-benchmark-dataset are comparing it to the libraries listed below
Sorting:
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 10 months ago
- ☆17Updated 10 months ago
- Baseline model for PPB-Affinity benchmark data☆29Updated 4 months ago
- Code for the paper "Learning to engineer protein flexibility".☆22Updated last week
- ☆24Updated 11 months ago
- Bib'23: Improved the Heterodimer Protein Complex Prediction with Protein Language Models☆15Updated last year
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆46Updated 10 months ago
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆40Updated 6 months ago
- Modelling protein conformational landscape with Alphafold☆52Updated 3 weeks ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Updated 7 months ago
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆39Updated 2 months ago
- Converts AlphaFold distograms into distance matrices and saves them into a number of formats☆12Updated 2 years ago
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆54Updated last year
- This is the first model that can simultaneously predict the RMSD of the ligand docking pose and the binding strength against the target.☆19Updated 8 months ago
- Protein-Ligand Binding Affinity Prediction with GNN and Transfer Learning From Protein Language Models☆33Updated last week
- ☆34Updated 2 years ago
- Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop☆14Updated last year
- Binding pocket optimization based on force fields and docking scoring functions☆34Updated 6 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- Calculate the RMSD between two antibody structure (including nanobody and antibody).☆11Updated 2 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆51Updated 4 months ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆13Updated last year
- ☆46Updated 6 months ago
- ☆24Updated 4 months ago
- ☆19Updated 10 months ago
- Open source code for AlphaFold.☆39Updated 2 years ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆72Updated last month
- IDPFold test version☆22Updated last year