haessar / peaks2utrLinks
A robust Python tool for the annotation of 3’ UTRs
☆20Updated 6 months ago
Alternatives and similar repositories for peaks2utr
Users that are interested in peaks2utr are comparing it to the libraries listed below
Sorting:
- ☆65Updated last week
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆108Updated last month
- k-mer learning materials☆74Updated 6 months ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆44Updated last month
- Simple pileup-based variant caller☆91Updated 4 months ago
- Tiberius is a deep learning gene finder.☆70Updated 2 weeks ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- Call select base modifications in PacBio HiFi reads☆14Updated 7 months ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 9 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆68Updated 2 months ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆57Updated last month
- A program for assessing the T2T genome continuity☆84Updated 2 weeks ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 7 months ago
- SRF: Satellite Repeat Finder☆97Updated last year
- A local-haplotagging-based small and structural variant caller☆79Updated last week
- A (very) simple script to QC Hi-C data.☆26Updated 8 months ago
- Show pangenome graphs in an easy way☆56Updated 3 weeks ago
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- Synteny Imager☆64Updated last month
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆85Updated last year
- Neural network classification of TE☆94Updated 3 months ago
- ☆44Updated 8 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆50Updated last month
- perSVade: personalized Structural Variation detection☆40Updated last month
- ☆32Updated 4 years ago
- Error correction of ONT transcript reads☆58Updated last year
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆57Updated this week