sylvainprigent / sdeconvLinks
2D and 3D image deconvolution with python
☆15Updated last year
Alternatives and similar repositories for sdeconv
Users that are interested in sdeconv are comparing it to the libraries listed below
Sorting:
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 7 months ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆21Updated last month
- A self-supervised denoising algorithm.☆28Updated last year
- Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data☆28Updated 2 months ago
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 9 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 8 months ago
- A napari plugin to analysis point spread functions.☆12Updated 9 months ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆23Updated last year
- Computational workflows to assess phototoxicity in live-cell microscopy experiments☆11Updated 4 months ago
- ☆12Updated 4 months ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆87Updated 4 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆101Updated 2 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated last week
- Light microscopy simulation in python.☆43Updated last week
- Pure python/C++ micro-manager ecosystem☆45Updated last week
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆54Updated last year
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆20Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- Generates simulated confocal data from a ground truth signal☆10Updated 3 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 2 weeks ago
- Particle tracking by solving linear assignment problem.☆61Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆89Updated last month
- navigate - open source light-sheet microscope controls☆38Updated last week
- A collection of useful python utilities from True North Intelligent Algorithms☆43Updated 2 weeks ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆20Updated this week
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated 2 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆18Updated last month