sylvainprigent / sdeconv
2D and 3D image deconvolution with python
☆13Updated this week
Related projects: ⓘ
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆44Updated this week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆59Updated 2 weeks ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆21Updated last month
- code of the registration and deconvolution project☆33Updated 3 years ago
- Place to discuss the future design of a universal microscope hardware interface☆16Updated 3 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆37Updated 11 months ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆70Updated 2 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆17Updated 2 weeks ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆15Updated this week
- ☆29Updated 4 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆16Updated 2 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆63Updated 2 weeks ago
- Accelerated Pixel and Object Classifiers (APOC)☆51Updated last year
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆37Updated 3 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆22Updated 4 years ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆25Updated last month
- A self-supervised denoising algorithm.☆24Updated 5 months ago
- A napari plugin for zarr backed OME-NGFF images☆27Updated 3 weeks ago
- A deep-learning library for N2V and friends☆28Updated this week
- Image acquisition software for mesoSPIM light-sheet microscopes.☆35Updated 3 weeks ago
- GPU accelerated 3D image deconvolution using CUDA☆32Updated 2 months ago
- Lattice light-sheet post-processing utility.☆26Updated 2 weeks ago
- ☆21Updated 3 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆23Updated 2 weeks ago
- ☆12Updated 4 years ago
- Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆16Updated last week
- navigate - open source light-sheet microscope controls☆23Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated 2 weeks ago
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated last year
- A napari plugin for clustering objects according to their properties.☆77Updated this week