2D and 3D image deconvolution with python
☆15Sep 20, 2024Updated last year
Alternatives and similar repositories for sdeconv
Users that are interested in sdeconv are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13May 1, 2025Updated 11 months ago
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Jun 6, 2023Updated 2 years ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- Resolution Enhancement Algorithm using Deblurring by Pixel Reassignment. This repository implements cutting-edge techniques for improving…☆32Aug 25, 2025Updated 7 months ago
- Collection of useful (to me) python scripts for interacting with napari☆12Aug 14, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Various parts made for fluorescence microscopy + optics work☆16Jul 22, 2019Updated 6 years ago
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆13Oct 13, 2025Updated 5 months ago
- A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.☆13Apr 24, 2024Updated last year
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Dec 1, 2025Updated 4 months ago
- [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.☆10Jan 11, 2022Updated 4 years ago
- A self-supervised denoising algorithm.☆28Apr 6, 2024Updated 2 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆54May 20, 2024Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Updated this week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated last year
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated 8 months ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 9 months ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆21Nov 24, 2025Updated 4 months ago
- A napari plugin for zarr backed OME-NGFF images☆46Updated this week
- Code for the paper: Image Denoising and the Generative Accumulation of Photons☆22Aug 2, 2023Updated 2 years ago
- ☆14Feb 24, 2026Updated last month
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cel…☆11Mar 12, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆52May 1, 2025Updated 11 months ago
- Imagej toolset to ease hyperstacks visualization and handling☆23Feb 9, 2026Updated 2 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 11 months ago
- 1d plotting in napari-based canvas.☆25Mar 30, 2026Updated last week
- Python program to generate NetworkX graphs from segmented images.☆14Apr 14, 2023Updated 2 years ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Apr 30, 2023Updated 2 years ago
- widget for PSF simulation with aberrations☆25Oct 31, 2023Updated 2 years ago
- A collection of LUTs for ImageJ/Fiji☆75Jun 20, 2020Updated 5 years ago
- Read and write ImageJ ROI format.☆89Feb 11, 2026Updated 2 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A tool for manual pointwise deformable registration using bigdataviewer.☆35Mar 18, 2026Updated 3 weeks ago
- 3D shape analysis using deep learning☆31Oct 8, 2025Updated 6 months ago
- A fast, multi-target voronoi tessellator using the SYCL framework☆19Jul 15, 2025Updated 8 months ago
- Multiscale Image Restoration for fluorescence microscopy☆10Jun 17, 2023Updated 2 years ago
- Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.☆18Dec 17, 2025Updated 3 months ago
- ☆37Mar 22, 2024Updated 2 years ago
- Scalable Optical Flow-based Image Montaging and Alignment☆94Mar 2, 2026Updated last month