grishkam / QuickFigures
QuickFigures is a toolset for creating scientific figures see publication for details
☆35Updated last year
Alternatives and similar repositories for QuickFigures:
Users that are interested in QuickFigures are comparing it to the libraries listed below
- A platform for compiling, analyzing, and exploring tracking data☆43Updated last week
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 4 months ago
- ImageJ macros to run Cellpose from Fiji (using the plugin from BIOP-EPFL) and to match nuclei and cell body label maps.☆14Updated 3 years ago
- ☆47Updated 4 months ago
- ☆19Updated 3 years ago
- StarDist plugin for napari☆37Updated 6 months ago
- Lectures for a napari training course☆50Updated last year
- Generate markdown notebooks from ImageJ Macro☆24Updated 3 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 4 months ago
- Commands and Classes for interfacing between Imaris and Fiji☆12Updated 5 months ago
- The 2023 version of cellPLATO☆14Updated 3 months ago
- quantixed FIJI update site☆16Updated last month
- EASI-FISH analysis pipeline for spatial transcriptomics☆33Updated 3 months ago
- ☆10Updated 4 years ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆62Updated last year
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆22Updated 3 years ago
- ☆15Updated 7 months ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆24Updated 5 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated this week
- ☆17Updated 2 years ago
- MethodsJ2☆14Updated 2 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 months ago
- ImageJ macros and scripts written at the imaging facility MRI☆33Updated this week
- Guides and code for 3D nuclear instance segmentation☆20Updated 2 months ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 3 years ago
- ☆29Updated 11 months ago
- Multiple file format reading directly into napari using pure Python☆35Updated 7 months ago
- A napari plugin for clustering objects according to their properties.☆82Updated last week