Alternatives and similar repositories for metabolomicsR

Users that are interested in metabolomicsR are comparing it to the libraries listed below

• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆66Updated 2 years ago
• junjunlab / ggSCvis
  Visualizing SingleCell data Using GGplot2
  ☆36Updated last year
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆69Updated 4 months ago
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆18Updated last year
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆40Updated 5 years ago
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆82Updated 2 years ago
• songw01 / MEGENA
  Multiscale embedded gene co-expression network analysis
  ☆57Updated 2 years ago
• sajuukLyu / ggunchull
  A ggplot extension for drawing smooth non-convex circles around a set of points.
  ☆18Updated last year
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆48Updated last year
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆66Updated last year
• ggjlab / scHCL
  ☆47Updated 5 years ago
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆38Updated last year
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆65Updated 4 years ago
• UMCUGenetics / primary-met-wgs-comparison
  Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.
  ☆18Updated 2 years ago
• MGI-tech-bioinformatics / DNBelab_C_Series_scRNA-analysis-software
  An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.
  ☆38Updated 3 years ago
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆46Updated 2 years ago
• kevlitchfield1 / CPI1000_paper
  ☆20Updated 4 years ago
• GuoBioinfoLab / STCAT
  The single T cell annotation tool for scRNA-seq data
  ☆23Updated 8 months ago
• foreverdream2 / dysfunction_interaction_test
  ☆30Updated 7 years ago
• the-ouyang-lab / ShinyCell2
  ShinyCell2 is a lightweight R package for building interactive, shareable apps to explore single-cell multi-omics, scATAC-seq and spatial…
  ☆50Updated 7 months ago
• wenweixiong / MARVEL
  ☆53Updated last year
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆40Updated 2 years ago
• Moonerss / CIBERSORT
  ☆43Updated last month
• liulab-dfci / RIMA_pipeline
  ☆89Updated 4 months ago
• alserglab / mascarade
  Generate masks for scRNA-seq clusters on t-SNE or UMAP plots
  ☆43Updated last week
• zdq0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆29Updated 3 years ago
• junjunlab / tackPlotR
  An R package to visualize bigwigs.
  ☆32Updated 3 years ago
• YutingPKU / SingleCell-Multiomics
  ☆71Updated 3 years ago
• KChen-lab / METAFlux
  ☆81Updated last year
• immunogenomics / SCENT
  Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA
  ☆82Updated 8 months ago