kevinblighe / E-MTAB-6141
Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
☆119Updated 4 years ago
Alternatives and similar repositories for E-MTAB-6141:
Users that are interested in E-MTAB-6141 are comparing it to the libraries listed below
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆162Updated 3 months ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆190Updated last year
- The package wrapping the book, for deployment via the Bioconductor build system.☆83Updated 4 months ago
- Simplify functional enrichment results☆113Updated 6 months ago
- ☆71Updated 3 years ago
- Visualizing transcript structure and annotation using ggplot2☆146Updated 6 months ago
- An R interface to enrichR☆90Updated last month
- Visualization of Functional Enrichment Result☆239Updated this week
- RNA-seq workflow: exploratory analysis and differential expression☆75Updated last year
- ☆58Updated 10 months ago
- Generate IGV style locus tracks from bigWig files in R☆154Updated 4 months ago
- R data package for annotating/converting Gene IDs☆163Updated 2 years ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆170Updated last month
- Easily install and load packages from the tidyomcis ecosystem☆64Updated last year
- Detecting sites of genomic enrichment☆190Updated last year
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆91Updated 5 months ago
- ☆87Updated last month
- Clone of the Bioconductor repository for the SingleR package.☆184Updated 3 weeks ago
- Mixed-effect model to test differences in cell type proportions from single-cell data, in R☆99Updated this week
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆101Updated 2 years ago
- Integrated Differential Expression and Pathway analysis☆130Updated last week
- Check strandedness of RNA-Seq fastq files☆119Updated 2 years ago
- A simple gene co-expression analyses workflow powered by tidyverse and graph analyses☆197Updated 8 months ago
- Tutorials on accessing public reference and genomic data☆31Updated 3 weeks ago
- my notes for scATACseq analysis☆122Updated 10 months ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆107Updated this week
- A short tutorial on how to use RSEM☆136Updated 4 years ago
- ChIP peak Annotation, Comparison and Visualization☆234Updated last month
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆80Updated this week
- DNA methylation analysis notes from Ming Tang☆83Updated 5 years ago