Bioconductor cheat sheet
☆194Aug 26, 2024Updated last year
Alternatives and similar repositories for bioc-refcard
Users that are interested in bioc-refcard are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated 2 years ago
- Training material for introductory R / Bioconductor courses☆96Mar 15, 2023Updated 3 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- Tidy up computational biology objects☆50Feb 1, 2019Updated 7 years ago
- Helper script for bioconductor/bioconductor_docker☆13May 19, 2026Updated 2 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆33Jun 3, 2022Updated 4 years ago
- Transcript quantification import for modular pipelines☆144Apr 15, 2026Updated 4 months ago
- Prepare Sailfish and Salmon output for downstream analysis☆41Jun 6, 2019Updated 7 years ago
- 🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment☆925Updated this week
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15May 8, 2026Updated 3 months ago
- Clustering cells from single cell RNA seq assays☆46Nov 19, 2018Updated 7 years ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆30May 19, 2017Updated 9 years ago
- RNAseq analysis notes from Ming Tang☆1,096Nov 15, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Genome data visualizations☆227Jan 10, 2026Updated 7 months ago
- 2018 Bioconductor Workshops☆77May 15, 2019Updated 7 years ago
- A collection of R functions to aid in host-pathogen genomic research☆12May 8, 2024Updated 2 years ago
- Introduction to Computational Biology☆34Updated this week
- A collection of papers and books that Storey Lab members should read and others may find useful☆49Oct 19, 2015Updated 10 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 7 years ago
- R/shiny interface for interactive visualization of data in SummarizedExperiment objects☆230Jul 13, 2026Updated last month
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Aug 17, 2016Updated 10 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- Stickers for some Bioconductor packages - feel free to contribute and/or modify.☆138Aug 6, 2026Updated last week
- Bioconductor package for management of multi-assay data☆76Apr 29, 2026Updated 3 months ago
- A R package for Grade of Membership model and Visualization of counts data:☆33Jan 15, 2021Updated 5 years ago
- R package for bcbio RNA-seq analysis.☆64Sep 9, 2024Updated last year
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆22May 23, 2025Updated last year
- Fast fusion detection using kallisto☆80Jun 11, 2025Updated last year
- Exon-exon splice junctions across SRA☆43Jul 30, 2021Updated 5 years ago
- ☆78Mar 6, 2014Updated 12 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Differential analysis of RNA-Seq☆316May 28, 2025Updated last year
- A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.☆337May 18, 2026Updated 3 months ago
- STAT540 Statistical Methods for High Dimensional Biology, January - April 2014☆18Apr 28, 2014Updated 12 years ago
- Course material for introductory R / Bioconductor courses☆44Mar 15, 2023Updated 3 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆168Jun 14, 2026Updated 2 months ago
- Materials for Genomics Data Science: Introduction to Bioconductor☆99Jul 16, 2024Updated 2 years ago
- [DEPRECATED] Docker containers for Bioconductor☆49Mar 15, 2023Updated 3 years ago