Alternatives and similar repositories for bioc-refcard

Users that are interested in bioc-refcard are comparing it to the libraries listed below

• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆163Updated 2 years ago
• pachterlab / sleuth
  Differential analysis of RNA-Seq
  ☆304Updated 3 weeks ago
• Bioconductor / LearnBioconductor
  Training material for introductory R / Bioconductor courses
  ☆82Updated 2 years ago
• kasperdanielhansen / genbioconductor
  Materials for Genomics Data Science: Introduction to Bioconductor
  ☆95Updated 11 months ago
• jtleek / genstats
  Statistics course for JHU Genomic Data Science Sequence
  ☆158Updated 9 years ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆317Updated 3 weeks ago
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆216Updated 8 months ago
• griffithlab / GenVisR
  Genome data visualizations
  ☆218Updated last year
• ropensci / biomartr
  Genomic Data Retrieval with R
  ☆222Updated 4 months ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆139Updated 2 months ago
• alserglab / fgsea
  Fast Gene Set Enrichment Analysis
  ☆405Updated this week
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆192Updated last year
• Hoohm / dropSeqPipe
  A SingleCell RNASeq pre-processing snakemake workflow
  ☆149Updated 2 years ago
• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆234Updated 2 months ago
• PoisonAlien / maftools
  Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
  ☆466Updated last month
• Bioconductor / CSAMA
  Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
  ☆94Updated last year
• jdblischak / singleCellSeq
  Batch effects and the effective design of single-cell gene expression studies
  ☆102Updated 5 years ago
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆246Updated last month
• PF2-pasteur-fr / SARTools
  Statistical Analysis of RNA-Seq Tools
  ☆107Updated 3 months ago
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆165Updated 6 months ago
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• obigriffith / biostar-tutorials
  Code for biostar tutorials - mostly R and Perl
  ☆50Updated 10 months ago
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆173Updated 2 months ago
• knausb / vcfR
  Tools to work with variant call format files
  ☆259Updated 4 months ago
• hbctraining / Intro-to-DGE
  ☆199Updated 3 months ago
• hms-dbmi / scde
  R package for analyzing single-cell RNA-seq data
  ☆175Updated last year
• hbctraining / Training-modules
  Materials for short, half-day workshops
  ☆334Updated 3 weeks ago
• hbctraining / DGE_workshop_salmon
  ☆72Updated 3 years ago
• al2na / methylKit
  R package for DNA methylation analysis
  ☆232Updated 3 months ago
• shenlab-sinai / ngsplot
  Quick mining and visualization of NGS data by integrating genomic databases
  ☆265Updated 2 years ago