Alternatives and similar repositories for genbioconductor

Users that are interested in genbioconductor are comparing it to the libraries listed below

• thelovelab / rnaseqGene
  RNA-seq workflow: exploratory analysis and differential expression
  ☆77Updated last year
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• Bioconductor / LearnBioconductor
  Training material for introductory R / Bioconductor courses
  ☆82Updated 2 years ago
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆163Updated 2 years ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆192Updated last year
• mikelove / bioc-refcard
  Bioconductor cheat sheet
  ☆189Updated 10 months ago
• Bioconductor / CSAMA
  Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
  ☆94Updated last year
• obigriffith / biostar-tutorials
  Code for biostar tutorials - mostly R and Perl
  ☆50Updated 10 months ago
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆173Updated 2 months ago
• mistrm82 / msu_ngs2015
  DE analysis module for Week3
  ☆66Updated 8 years ago
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆76Updated 6 years ago
• hbctraining / DGE_workshop_salmon
  ☆72Updated 3 years ago
• PF2-pasteur-fr / SARTools
  Statistical Analysis of RNA-Seq Tools
  ☆107Updated 3 months ago
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆102Updated last month
• ShixiangWang / sigminer
  🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…
  ☆153Updated 8 months ago
• ropensci / biomartr
  Genomic Data Retrieval with R
  ☆222Updated 4 months ago
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆216Updated 8 months ago
• hbctraining / Accessing_public_genomic_data
  Tutorials on accessing public reference and genomic data
  ☆30Updated 4 months ago
• praneet1988 / CSBB-Shiny
  Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researcher…
  ☆36Updated 2 years ago
• Bioconductor / BiocIntro
  Course material for introductory R / Bioconductor courses
  ☆44Updated 2 years ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆139Updated 2 months ago
• jokergoo / InteractiveComplexHeatmap
  Make Interactive Complex Heatmaps
  ☆135Updated last year
• iDEP-SDSU / idep
  Integrated Differential Expression and Pathway analysis
  ☆132Updated last week
• hbctraining / main
  ☆53Updated last week
• csbl-usp / CEMiTool
  Co-Expression Module Identification Tool (CEMiTool) official repository
  ☆22Updated last year
• MaayanLab / Zika-RNAseq-Pipeline
  An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study
  ☆103Updated 2 years ago
• hawn-lab / workshops_UW_Seattle
  ☆26Updated 3 years ago
• thelovelab / tximport
  Transcript quantification import for modular pipelines
  ☆138Updated last year
• sjcockell / lockdown-learning
  Scripts written for my Bioinformatics-along on YouTube: https://www.youtube.com/playlist?list=PLzfP3sCXUnxEu5S9oXni1zmc1sjYmT1L9
  ☆75Updated 3 years ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆317Updated 3 weeks ago