greenelab / tybaltLinks
Training and evaluating a variational autoencoder for pan-cancer gene expression data
☆172Updated 6 years ago
Alternatives and similar repositories for tybalt
Users that are interested in tybalt are comparing it to the libraries listed below
Sorting:
- Towards Gene Expression Convolutions using Gene Interaction Graphs☆75Updated 3 years ago
- ☆101Updated last year
- Deep learning for single-cell transcript counts☆88Updated 8 months ago
- Deep count autoencoder for denoising scRNA-seq data☆263Updated last year
- ☆66Updated 2 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 3 years ago
- covolutional neural network based coexpression analysis☆79Updated 5 years ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools☆136Updated 3 years ago
- Model zoo for genomics☆172Updated last year
- TF MOtif Discovery from Importance SCOres☆158Updated last month
- Kipoi's model zoo API☆239Updated last year
- Reproducing the experiments of the paper "Deep generative modeling for single-cell transcriptomics"☆56Updated 6 years ago
- Framework for Interpretable Neural Networks☆111Updated 8 months ago
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆125Updated 3 years ago
- predicting expression effects of human genome variants ab initio from sequence☆132Updated 10 months ago
- Building classifiers using cancer transcriptomes across 33 different cancer-types☆122Updated 6 years ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆163Updated 4 years ago
- Deep Embedding for Single-cell Clustering☆88Updated last year
- ☆101Updated 2 years ago
- Models and datasets for perturbational single-cell omics☆168Updated 3 years ago
- Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks☆86Updated last year
- Wasserstein Generative Adversarial Network for analysing scRNAseq data☆34Updated 4 years ago
- Subpopulation detection in high-dimensional single-cell data☆141Updated 5 years ago
- DCell browser and gene deletion simulator☆124Updated 2 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- Variational autoencoder for single cell RNA-seq datasets☆44Updated 8 years ago
- Cancer Drug Response prediction using a Recommender System☆42Updated 2 years ago
- Single-cell ATAC-seq analysis via Latent feature Extraction☆103Updated 2 years ago
- Conditional out-of-distribution prediction☆62Updated last year
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆89Updated 3 years ago