greenelab / generic-expression-patternsLinks
Distinguishing between generic and experiment-specific gene expression signals.
☆12Updated 2 years ago
Alternatives and similar repositories for generic-expression-patterns
Users that are interested in generic-expression-patterns are comparing it to the libraries listed below
Sorting:
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Updated 4 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Updated 7 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- iDEP: integrated Differential Expression & Pathway analysis☆15Updated 6 years ago
- Reproducible GSEA Benchmarking☆13Updated 3 weeks ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- R tools to interact with hap.py output☆15Updated 5 years ago
- Gene Set Enrichment Analysis in Python☆11Updated 6 years ago
- ☆15Updated 2 years ago
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- Code to run OncoSig Analyses☆18Updated 4 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆20Updated 2 months ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆29Updated 6 years ago
- Open Targets Genetics UI☆14Updated 4 months ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries☆13Updated 5 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 8 months ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- ☆13Updated 7 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated last year
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 3 weeks ago
- Template for building a bioconductor workshop package using github actions☆20Updated 10 months ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 4 years ago