Morwey / ezreverseLinks
A Python Shiny project with Joachim Goedhart
☆17Updated 11 months ago
Alternatives and similar repositories for ezreverse
Users that are interested in ezreverse are comparing it to the libraries listed below
Sorting:
- QC and cell type assignment for patch-seq transcriptomics data☆20Updated last year
- ☆8Updated 3 years ago
- LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.☆86Updated last year
- ☆34Updated 2 weeks ago
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated 2 months ago
- COmmon COordinate FRAMEwork in R☆36Updated 5 years ago
- ABBA, controlled from python☆13Updated 2 months ago
- Tools for working with single-neuron morphological reconstructions☆21Updated last year
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆38Updated 10 months ago
- ☆39Updated 10 months ago
- computes intrinsic cell features from intracellular electrophysiology data☆27Updated 7 months ago
- Calcium imaging inter-session alignment☆10Updated this week
- ☆19Updated last year
- ☆20Updated 6 years ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆74Updated 3 months ago
- Phenotypic variation of transcriptomic cell types in mouse motor cortex☆25Updated 3 years ago
- Efficient cell detection in large images using cellfinder in napari☆23Updated last year
- A Fiji plugin that automatically quantify synapses from multi-channel fluorescence microscopy images.☆14Updated 9 months ago
- MS Word template for styling a manuscript for a bioRxiv submission☆38Updated 6 years ago
- QuickFigures is a toolset for creating scientific figures see publication for details☆36Updated last year
- Utilities for formatting matplotlib figures☆31Updated 3 months ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆88Updated 3 years ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆34Updated 4 months ago
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated 6 months ago
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 4 years ago