www-bioinfo-org / CNCILinks
Coding-Non-Coding Index (CNCI)
☆41Updated 7 years ago
Alternatives and similar repositories for CNCI
Users that are interested in CNCI are comparing it to the libraries listed below
Sorting:
- ☆89Updated 5 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆66Updated last year
- FEELnc : FlExible Extraction of LncRNA☆90Updated 4 months ago
- Allele-specific alignment sorting☆61Updated 2 years ago
- A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets☆84Updated 3 years ago
- fork of RSeQC python RNAseq metrics suit of tools☆49Updated 6 years ago
- Scripts for next generation sequencing☆49Updated 6 years ago
- A versatile aligning pipeline for bisulfite sequencing data☆66Updated 7 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 4 months ago
- ☆60Updated 4 months ago
- Tools for analyzing DNA methylation data☆44Updated last week
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆66Updated last year
- ☆50Updated 7 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆29Updated 6 years ago
- phasing and Allele Specific Expression from RNA-seq☆117Updated last year
- DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies …☆37Updated 3 years ago
- New version of JACUSA -> 2.0☆30Updated 2 weeks ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆53Updated 4 months ago
- Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture…☆91Updated 3 years ago
- release version☆55Updated 3 years ago
- DCC/DAC methylation pipeline source☆57Updated 5 years ago
- Reference data: BED files, genes, transcripts, variations.☆88Updated 8 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 7 years ago
- QDNAseq package for Bioconductor☆53Updated last year
- ENCODE long read RNA-seq pipeline☆51Updated 2 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- Tumor Mutational Burden☆63Updated 4 months ago