Alternatives and similar repositories for scRNA_10X:

Users that are interested in scRNA_10X are comparing it to the libraries listed below

• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆146Updated 4 years ago
• WeiSong-bio / jmzeng1314-5years-summarize
  ☆117Updated 5 years ago
• jmzeng1314 / AnnoProbe
  ☆105Updated 2 years ago
• jmzeng1314 / methy_array
  ☆98Updated 4 years ago
• jmzeng1314 / TCGA_BRCA
  ☆45Updated 5 years ago
• junjunlab / GseaVis
  An implement R package to visualize GSEA results
  ☆147Updated 2 months ago
• jmzeng1314 / my-R
  a small collection for my R scripts
  ☆165Updated 6 years ago
• xjsun1221 / tinyarray
  plots function for array
  ☆91Updated 9 months ago
• jmzeng1314 / idmap1
  ☆28Updated 5 years ago
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆233Updated last week
• ixxmu / mp_duty
  抓取网络文章到github issues保存
  ☆143Updated this week
• biotrainee / RiA2
  Source code for R in Action, Second Edition
  ☆29Updated 7 years ago
• sunduanchen / Scissor
  Scissor package
  ☆210Updated 10 months ago
• basilkhuder / Seurat-to-RNA-Velocity
  A guide to using a Seurat object in conjunction with RNA Velocity
  ☆137Updated 3 years ago
• jmzeng1314 / rnaseq_tutorial
  Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…
  ☆16Updated 5 years ago
• jmzeng1314 / scRNA_smart_seq2
  ☆304Updated 5 years ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• navinlabcode / copykat
  ☆226Updated 8 months ago
• Swarbricklab-code / BrCa_cell_atlas
  Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".
  ☆113Updated 5 months ago
• Sijin-ZhangLab / PanMyeloid
  ☆101Updated 4 years ago
• JarningGau / ProjectSVR
  A package for reference mapping and nice visualization
  ☆19Updated 10 months ago
• ayueme / easyTCGA
  Make TCGA download and prepare easy!
  ☆122Updated 10 months ago
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆74Updated 5 months ago
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆121Updated 7 months ago
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆131Updated 7 months ago
• tjhwangxiong / TCGAplot
  A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…
  ☆97Updated 5 months ago
• KPLab / SCS_CAF
  ☆31Updated 5 years ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆77Updated 4 months ago
• genecell / single-cell-papers-with-code
  Papers with code for single cell related papers
  ☆280Updated last year
• dviraran / SingleR
  SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
  ☆289Updated 4 years ago