Alternatives and similar repositories for scRNA_10X:

Users that are interested in scRNA_10X are comparing it to the libraries listed below

• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆146Updated 4 years ago
• jmzeng1314 / AnnoProbe
  ☆106Updated 2 years ago
• WeiSong-bio / jmzeng1314-5years-summarize
  ☆117Updated 5 years ago
• jmzeng1314 / methy_array
  ☆100Updated 5 years ago
• junjunlab / GseaVis
  An implement R package to visualize GSEA results
  ☆166Updated last month
• jmzeng1314 / TCGA_BRCA
  ☆45Updated 5 years ago
• jmzeng1314 / my-R
  a small collection for my R scripts
  ☆166Updated 6 years ago
• xjsun1221 / tinyarray
  plots function for array
  ☆92Updated 10 months ago
• biotrainee / RiA2
  Source code for R in Action, Second Edition
  ☆29Updated 8 years ago
• jmzeng1314 / scRNA_smart_seq2
  ☆308Updated 5 years ago
• jmzeng1314 / idmap1
  ☆29Updated 5 years ago
• jmzeng1314 / my_WGCNA
  ☆278Updated 5 years ago
• navinlabcode / copykat
  ☆231Updated 10 months ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆238Updated 3 weeks ago
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆77Updated 6 months ago
• jmzeng1314 / R_bilibili
  ☆169Updated 6 years ago
• Sijin-ZhangLab / PanMyeloid
  ☆102Updated 4 years ago
• jmzeng1314 / rnaseq_tutorial
  Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…
  ☆16Updated 5 years ago
• Lindseynicer / Analysing-10X-ScRNA-data-Wang-et-al-2020-Nat-Commun-
  I redo the ScRNA analysis in the paper of Wang et al 2020, Nat Comm. Here's my modified script for Helen He Zhu github (https://github.co…
  ☆12Updated 3 years ago
• sunduanchen / Scissor
  Scissor package
  ☆216Updated 11 months ago
• MGI-tech-bioinformatics / DNBelab_C_Series_HT_scRNA-analysis-software
  An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets
  ☆90Updated 2 weeks ago
• genecell / single-cell-papers-with-code
  Papers with code for single cell related papers
  ☆280Updated last year
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆292Updated 2 weeks ago
• basilkhuder / Seurat-to-RNA-Velocity
  A guide to using a Seurat object in conjunction with RNA Velocity
  ☆138Updated 3 years ago
• YutingPKU / SingleCell-Multiomics
  ☆66Updated 2 years ago
• ixxmu / mp_duty
  抓取网络文章到github issues保存
  ☆150Updated this week
• junjunlab / scRNAtoolVis
  Useful functions to make your scRNA-seq plot more cool!
  ☆334Updated 3 months ago
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆133Updated 8 months ago
• Swarbricklab-code / BrCa_cell_atlas
  Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".
  ☆113Updated 7 months ago