facebookresearch / Clinical-Trial-ParserLinks
Library for converting clinical trial eligibility criteria to a machine-readable format.
☆174Updated 3 years ago
Alternatives and similar repositories for Clinical-Trial-Parser
Users that are interested in Clinical-Trial-Parser are comparing it to the libraries listed below
Sorting:
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- ☆219Updated 7 months ago
- ☆99Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆83Updated 2 weeks ago
- An information extraction system for free-text eligibility criteria☆37Updated 6 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆178Updated 3 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆331Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆152Updated last year
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆69Updated this week
- System for Medical Concept Extraction and Linking☆412Updated 11 months ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆102Updated 4 years ago
- ☆152Updated last year
- clinical free text de-identification software☆41Updated 6 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆574Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 3 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 3 months ago
- Python wraper for MetaMap☆174Updated 5 years ago
- Medical Concept Annotation Tool☆504Updated 2 weeks ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆170Updated 2 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆424Updated 2 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆156Updated 2 years ago
- A project for developing transformer-based models for clinical relation extraction☆129Updated last year
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 3 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medic…☆274Updated last year
- ☆55Updated 5 years ago
- Recognize bio-medical entities from a text corpus☆126Updated last year
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- ☆70Updated 3 years ago