clinicalml / HealthKnowledgeGraphLinks
Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data
☆101Updated 4 years ago
Alternatives and similar repositories for HealthKnowledgeGraph
Users that are interested in HealthKnowledgeGraph are comparing it to the libraries listed below
Sorting:
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- ☆98Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32Updated 2 years ago
- Medical Relations and Entities Extraction☆36Updated 3 years ago
- ☆55Updated 5 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 3 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…☆55Updated 6 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- PMC-Patients☆97Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- An information extraction system for free-text eligibility criteria☆37Updated 6 years ago
- PDD Graph : Bridging MIMIC-III and Linked Data Cloud☆37Updated 4 months ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping…☆21Updated 6 years ago
- ☆152Updated last year
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated last year
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Updated 5 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Code for the emrQA question answering dataset☆150Updated 3 years ago
- Mapping the MIMIC-III database to the OMOP schema☆136Updated last year
- A near real-time named-entity recognizer☆60Updated last year
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆330Updated 3 years ago
- ☆34Updated 8 years ago
- Python library for hierarchy of ICD9 Codes☆104Updated 6 years ago