clinicalml / HealthKnowledgeGraphLinks
Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data
☆104Updated 5 years ago
Alternatives and similar repositories for HealthKnowledgeGraph
Users that are interested in HealthKnowledgeGraph are comparing it to the libraries listed below
Sorting:
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32Updated 2 years ago
- An information extraction system for free-text eligibility criteria☆38Updated 7 years ago
- ☆101Updated 3 years ago
- Medical Relations and Entities Extraction☆37Updated 3 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆88Updated 3 years ago
- ☆152Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated 4 months ago
- ☆70Updated 3 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Updated 2 years ago
- ☆70Updated 4 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 4 years ago
- ☆55Updated 5 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆62Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆153Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆342Updated 4 years ago
- Source code for Medical Concept Embedding with Time-Aware Embedding☆22Updated 6 years ago
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Updated 8 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆66Updated 4 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 5 years ago
- A near real-time named-entity recognizer☆63Updated this week
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- Medical Similarity Dataset creation from SNOMED☆28Updated 3 years ago
- PMC-Patients☆102Updated last year
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Updated 6 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 6 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆49Updated 3 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…☆55Updated 7 years ago
- Library for converting clinical trial eligibility criteria to a machine-readable format.☆177Updated 3 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆46Updated 5 years ago