Alternatives and similar repositories for KAZU

Users that are interested in KAZU are comparing it to the libraries listed below

• dmis-lab / BERN2
  BERN2: an advanced neural biomedical namedentity recognition and normalization tool
  ☆196Updated last year
• gyorilab / gilda
  Grounding of biomedical named entities with contextual disambiguation
  ☆44Updated 2 months ago
• related-sciences / nxontology
  NetworkX-based Python library for representing ontologies
  ☆90Updated 2 years ago
• hpi-dhc / xmen
  ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization
  ☆29Updated 9 months ago
• cthoyt / umls_downloader
  Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically
  ☆40Updated last year
• luozhhub / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆26Updated 3 years ago
• pathology-dynamics / biomedical-entity-linking
  ☆20Updated last month
• callahantiff / PheKnowLator
  PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
  ☆194Updated last year
• ncbi-nlp / TeamTat
  Text annotation tool for team collaboration
  ☆42Updated last year
• librairy / bio-ner
  Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…
  ☆121Updated 3 years ago
• bionlplab / bioc
  Data structures and code to read/write BioC XML and Json.
  ☆32Updated 2 years ago
• AstraZeneca / onto_merger
  OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.
  ☆100Updated last year
• metapub / metapub
  Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.
  ☆128Updated last month
• OHNLP / MedTator
  A Serverless Text Annotation Tool for Corpus Development
  ☆57Updated 7 months ago
• sg-wbi / belb
  Biomedical Entity Linking Benchmark
  ☆14Updated 9 months ago
• LHNCBC / SemRep
  ☆70Updated 3 years ago
• Aitslab / EasyNER
  a customzable pipeline for information extraction
  ☆17Updated 4 months ago
• Novartis / ontobrowser
  OntoBrowser is a web-based application for managing ontologies
  ☆43Updated 2 years ago
• bigscience-workshop / biomedical
  Tools for curating biomedical training data for large-scale language modeling
  ☆484Updated 9 months ago
• rcolinp / clinical_informatics_umls
  An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…
  ☆44Updated last year
• DiseaseOntology / SymptomOntology
  The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…
  ☆42Updated last year
• RTXteam / RTX-KG2
  Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
  ☆48Updated 3 weeks ago
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆85Updated last month
• dreji18 / Bio-Epidemiology-NER
  Recognize bio-medical entities from a text corpus
  ☆127Updated 2 years ago
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆152Updated 2 years ago
• chenzxlabhzau / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆26Updated 4 years ago
• salrowili / BioM-Transformers
  BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA
  ☆36Updated last year
• icd-codex / icd-codex
  python library for graphical and continuous representations of ICD9 and ICD10 codes
  ☆41Updated 8 months ago
• clinicalml / prancer
  Platform enabling Rapid Annotation for Clinical Entity Recognition
  ☆49Updated 3 years ago
• lisavirginia / clinical-abbreviations
  ☆66Updated 4 years ago