Alternatives and similar repositories for clinicalXLNet

Users that are interested in clinicalXLNet are comparing it to the libraries listed below

• asappresearch / clip
  ☆29Updated 3 years ago
• gmichalo / UmlsBERT
  ☆98Updated 3 years ago
• Yuqi92 / deep-patient-representation-mimiciii-multitask
  Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction
  ☆32Updated 5 years ago
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆31Updated last year
• luoyuanlab / Clinical-Longformer
  ☆61Updated last year
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆94Updated last year
• emnlp-mimic / mimic
  ☆22Updated 3 years ago
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆81Updated this week
• som-shahlab / ehr-rwe
  Weak supervision methods for extracting real world evidence from EHRs
  ☆34Updated 5 years ago
• simonlevine / clinical-longformer
  ☆38Updated 3 years ago
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆147Updated last year
• lsy3 / clinical-notes-diagnosis-dl-nlp
  ☆70Updated 3 years ago
• dchang56 / snomed_kge
  ☆30Updated 4 years ago
• sebastianGehrmann / phenotyping
  This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping…
  ☆21Updated 6 years ago
• r-mal / umls-embeddings
  Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System
  ☆40Updated 5 years ago
• beamandrew / cui2vec
  ☆55Updated 5 years ago
• nwams / ClinicalBERT-Deep-Learning--Predicting-Hospital-Readmission-Using-Transformer
  Blog post on Medium
  ☆49Updated 2 years ago
• XiangruiCAI / mce
  Source code for Medical Concept Embedding with Time-Aware Embedding
  ☆22Updated 5 years ago
• mp2893 / mime
  MiME Repository
  ☆105Updated 5 years ago
• umassbento / ehrbert
  A fine-tuned BERT using EHR notes.
  ☆14Updated 5 years ago
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆108Updated 2 years ago
• jingsongs / EHR2Vec
  EHR2Vec is a embedding translation tool for medical entities based on attention mechanism. We have provided a version of tensorflow imple…
  ☆13Updated 4 years ago
• uf-hobi-informatics-lab / ClinicalTransformerRelationExtraction
  A project for developing transformer-based models for clinical relation extraction
  ☆128Updated last year
• jayded / evidence-inference
  Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…
  ☆62Updated 3 years ago
• acadTags / Rare-disease-identification
  Rare disease identification from free-text clinical notes with ontologies and weak supervision
  ☆32Updated 2 years ago
• asappresearch / kbc-pomr
  Code for the paper "Knowledge Base Completion for Constructing Problem-Oriented Medical Records" at MLHC 2020
  ☆11Updated 4 years ago
• clinicalml / HealthKnowledgeGraph
  Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data
  ☆101Updated 4 years ago
• BarnesLab / Patient2Vec
  Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record
  ☆107Updated 6 years ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆73Updated 2 years ago
• panushri25 / emrQA
  Code for the emrQA question answering dataset
  ☆150Updated 3 years ago