Smith-Waterman Acceleration on Intel’s FPGA with OpenCL for Long DNA Sequences
☆19Jan 25, 2019Updated 7 years ago
Alternatives and similar repositories for SWIFOLD
Users that are interested in SWIFOLD are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jul 1, 2015Updated 11 years ago
- A smartcard manager (PKCS11)☆12Jan 22, 2021Updated 5 years ago
- ☆30Apr 26, 2019Updated 7 years ago
- Hardware Acceleration of Long Read Pairwise Overlapping in Genome Sequencing: Open Source Repository☆35Nov 8, 2024Updated last year
- [DAC 2020] Analysis and Optimization of the Implicit Broadcasts in FPGA HLS to Improve Maximum Frequency☆32Feb 17, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This library provides access to nRF-52 and nRF-53 peripherals in Rust.☆11Oct 10, 2026Updated 3 weeks ago
- Shouji is fast and accurate pre-alignment filter for banded sequence alignment calculation. Described in the Bioinformatics journal paper…☆19Jun 3, 2019Updated 7 years ago
- Repository to hold fabscalar project and simulations☆13Mar 17, 2015Updated 11 years ago
- Simple MIDAS Examples☆12Nov 25, 2018Updated 7 years ago
- GateKeeper: Fast Alignment Filter for DNA Short Read Mapping☆23Mar 5, 2019Updated 7 years ago
- Multi-Platform Architecture for Sequence Aligner (MASA) is a flexible software framework that simplifies the creation of DNA sequence ali…☆12Oct 22, 2021Updated 5 years ago
- ☆12Oct 16, 2026Updated 2 weeks ago
- Python Modeling Interface☆14Updated this week
- ☆17Oct 13, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 4 years ago
- Compressed, associative, and exact hash table for k-mers☆11Oct 15, 2026Updated 2 weeks ago
- Exploring Shared Virtual Memory Abstractions in OpenCL Tools for FPGAs☆18Dec 7, 2017Updated 8 years ago
- An Open-Source SCAlable Interface for ISA Extensionsfor RISC-V Processors. New Version:☆17Feb 29, 2024Updated 2 years ago
- Hardware Acceleration of Banded Smith-Waterman Algorithm on an FPGA using Systolic array based architecture.☆12Nov 26, 2022Updated 3 years ago
- FPGA-supported OpenCV Prototype (Added new FPGA OpenCV module, modified opencv-core to support Altera FPGA callstream)☆17Aug 24, 2017Updated 9 years ago
- Lectures and Labs for Data Parallel Computing and DPC++. Sponsored by Intel Corporation.☆13Apr 7, 2022Updated 4 years ago
- ☆28May 30, 2025Updated last year
- OS for physically reconfigurable matter☆19Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14Apr 20, 2026Updated 6 months ago
- Source code for the software implementations of the GenASM algorithms proposed in our MICRO 2020 paper: Senol Cali et. al., "GenASM: A Hi…☆32Dec 19, 2022Updated 3 years ago
- An open-source automated peptide synthesizer based on Arduino and Python☆15Dec 19, 2025Updated 10 months ago
- small and independent checkpoint☆12Nov 4, 2023Updated 2 years ago
- A Lossy compressor for Quality Scores in Genomic Data☆12Oct 4, 2016Updated 10 years ago
- TradeBuild Trading Platform version 2.7☆13Feb 24, 2026Updated 8 months ago
- NitroTPM Attestation Samples☆21Sep 10, 2026Updated last month
- Maratona de Programação UnB (ICPC)☆14May 18, 2020Updated 6 years ago
- Sentinel-1 Instrument Source Packets decoder☆15Feb 24, 2026Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆14Jul 26, 2021Updated 5 years ago
- An alternative Vivado custom design example (to fully Vitis) for the User Logic Partition targeting VCK5000☆14Jul 16, 2024Updated 2 years ago
- HLS-based framework to accelerate the implementation of 2-D DP kernels on FPGA☆15Mar 26, 2026Updated 7 months ago
- Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series☆14Oct 17, 2025Updated last year
- ☆10Jan 15, 2023Updated 3 years ago
- SYCL-based 2D Stencil Simulation Framework☆19May 3, 2026Updated 5 months ago
- Fonts code (http://ilab.usc.edu/datasets/fonts)☆11Apr 14, 2021Updated 5 years ago