Darwin: A co-processor for long read alignment
☆16Apr 5, 2019Updated 7 years ago
Alternatives and similar repositories for darwin
Users that are interested in darwin are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Co-processor for whole genome alignment☆13Jun 6, 2020Updated 6 years ago
- GenDP: A Dynamic Programming Framework for Genome Sequencing Analysis☆17Jan 12, 2024Updated 2 years ago
- A benchmark suite to study the performance characteristics of genomics applications☆32Oct 21, 2024Updated last year
- ☆15Aug 16, 2025Updated 10 months ago
- Source code for the software implementations of the GenASM algorithms proposed in our MICRO 2020 paper: Senol Cali et. al., "GenASM: A Hi…☆32Dec 19, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆52Jul 27, 2022Updated 3 years ago
- Public Release of Stream-Dataflow☆14May 17, 2019Updated 7 years ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆18Jun 28, 2024Updated 2 years ago
- Tensorflow: Generalizing Across Domains via Cross-Gradient Training☆15May 11, 2018Updated 8 years ago
- Genomics datastructures using Apache Arrow☆21Nov 19, 2020Updated 5 years ago
- Benchmark workloads of Nightcore☆12Feb 15, 2021Updated 5 years ago
- GateKeeper: Fast Alignment Filter for DNA Short Read Mapping☆22Mar 5, 2019Updated 7 years ago
- A Scalable GPU-Based Whole Genome Aligner, published in SC20: https://doi.ieeecomputersociety.org/10.1109/SC41405.2020.00043☆72Aug 7, 2024Updated last year
- Source code for the software implementation of SeGraM proposed in our ISCA 2022 paper: Senol Cali et. al., "SeGraM: A Universal Hardware …☆13Nov 3, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- 3D position based fluids implemented with Taichi.☆14Mar 28, 2023Updated 3 years ago
- A GPU-Accelerated In-Memory Key-Value Store (AWS-focused fork)☆28Nov 1, 2017Updated 8 years ago
- JPStream: JSONPath Stream Processing in Parallel☆25Nov 15, 2022Updated 3 years ago
- ☆22Sep 16, 2021Updated 4 years ago
- Parallel Sequence to Graph Alignment☆35Nov 26, 2022Updated 3 years ago
- Backend Compiler for Scaffold