Scripts for analysis of genome-wide perturb-seq in primary human T cells
☆19Jun 1, 2026Updated 2 months ago
Alternatives and similar repositories for GWT_perturbseq_analysis_2025
Users that are interested in GWT_perturbseq_analysis_2025 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Day 2 of ACAD's 2018 Advanced Bioinformatics Workshop☆12Nov 27, 2018Updated 7 years ago
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆37Mar 1, 2026Updated 5 months ago
- ☆13Apr 10, 2026Updated 4 months ago
- Benchmark for agentic single cell data analysis☆26Jun 10, 2026Updated 2 months ago
- Robust and efficient analysis of single-cell perturbation studies☆15Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A repository for reproducing experiments from the TxPert paper☆44Mar 25, 2026Updated 4 months ago
- ☆42Jan 19, 2026Updated 6 months ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆15Feb 23, 2026Updated 5 months ago
- ☆13Jun 4, 2023Updated 3 years ago
- Single-cell perturbation effects prediction benchmark☆99May 6, 2026Updated 3 months ago
- ☆52Jun 16, 2025Updated last year
- Causal Differential Networks (ICML 2025)☆16Jun 3, 2025Updated last year
- Automated ingestion and conversion of various single-cell data formats, within and across species☆16Jan 26, 2026Updated 6 months ago
- pseudobulking on an AnnData object☆37Jun 17, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Multigrate: multiomic data integration for single-cell genomics☆34Aug 3, 2026Updated last week
- ☆19May 29, 2026Updated 2 months ago
- Single-cell perturbation analysis☆338Updated this week
- GEMTools main repository☆17Jun 21, 2022Updated 4 years ago
- ☆17Jul 8, 2024Updated 2 years ago
- A Predictive World Model of the Transcriptome☆35Oct 18, 2025Updated 9 months ago
- CosMx Spatial Molecular Imager-derived cell profiles to aid in cell typing of SMI data.☆38Jan 24, 2025Updated last year
- Contrastive pre-training for technology-agnostic single-cell representations beyond reconstruction☆38Updated this week
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Jul 15, 2019Updated 7 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Conveniently process a dictionary of anndatas☆23Apr 17, 2026Updated 3 months ago
- This is a read-only mirror of the CRAN R package repository. GOplot — Visualization of Functional Analysis Data. Homepage: https://gith…☆15Mar 30, 2016Updated 10 years ago
- ☆25Apr 15, 2016Updated 10 years ago
- Fast and scalable inference for single-cell differential gene expression of multiple patients☆15Jul 3, 2026Updated last month
- ☆59Apr 7, 2026Updated 4 months ago
- Code for the paper: Mixed Models with Multiple Instance Learning☆22Nov 10, 2025Updated 9 months ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆21Jun 1, 2023Updated 3 years ago
- ☆99Aug 12, 2024Updated last year
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆150Aug 14, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆30Oct 4, 2024Updated last year
- ☆70Jan 14, 2026Updated 6 months ago
- Scripts and Snakemake pipeline used in the EMBL-ABR webinar☆13Jul 24, 2019Updated 7 years ago
- ☆26Jan 10, 2025Updated last year
- ☆10Nov 29, 2022Updated 3 years ago
- Differential Evolution Algorithm which uses Non-dominated Sorting for Multi-Objective Optimization☆10Mar 11, 2020Updated 6 years ago
- REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability☆15Dec 16, 2023Updated 2 years ago