☆51Jun 16, 2025Updated 10 months ago
Alternatives and similar repositories for perturblib
Users that are interested in perturblib are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Jul 8, 2022Updated 3 years ago
- Tahoe-x1 is a single cell foundation model designed for gigascale datasets☆147Jan 29, 2026Updated 3 months ago
- Package to preprocess ontologies and train OntoVAE models.☆15Jan 7, 2025Updated last year
- Python version of DISCO toolkit☆12Nov 21, 2024Updated last year
- BulkFormer: A large-scale foundation model for human bulk transcriptomes☆57Dec 14, 2025Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆25Dec 2, 2021Updated 4 years ago
- Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information (ICLR 2023)☆18Jun 15, 2025Updated 10 months ago
- ☆62Jan 14, 2026Updated 3 months ago
- Reproduce analyses and baselines from the State paper☆14Feb 25, 2026Updated 2 months ago
- Code and example of the D-SPIN framework☆25Mar 12, 2026Updated last month
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆145Aug 14, 2024Updated last year
- ☆23Jun 5, 2021Updated 4 years ago
- A Cellular Regulatory Network-Aware Transcriptomics Foundation Model☆37Dec 18, 2025Updated 4 months ago
- ☆82Jul 18, 2025Updated 9 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Primary RNA sequence model☆42May 20, 2024Updated last year
- A model developed for the generation of scRNA-seq data☆90Jan 21, 2026Updated 3 months ago
- ☆27Oct 22, 2025Updated 6 months ago
- DOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Ne…☆14Jul 16, 2025Updated 9 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆125Aug 3, 2025Updated 9 months ago
- An open-source platform for developing protein models beyond AlphaFold.☆12Jul 15, 2025Updated 9 months ago
- An App to provision the App of Device Owner on other devices☆12Mar 13, 2018Updated 8 years ago
- SOMA PyTorch loaders☆14Sep 24, 2025Updated 7 months ago
- Single-cell Analysis of Host-Microbiome Interactions☆11Jul 17, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17Apr 27, 2026Updated last week
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆15Apr 27, 2025Updated last year
- Few shot learning for cancer☆37Nov 17, 2021Updated 4 years ago
- BioMCP: Enabling agent-based biomedical R&D☆18Mar 11, 2025Updated last year
- ☆16Apr 29, 2024Updated 2 years ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆35Apr 2, 2025Updated last year
- ☆13Dec 29, 2021Updated 4 years ago
- ☆10Nov 29, 2022Updated 3 years ago
- CellNavi is a deep learning framework designed to predict genes driving cellular transitions.☆48Mar 4, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆14Oct 20, 2023Updated 2 years ago
- 自己背单词写的脚本/支持自定义词库/发音/随机顺序/正确率记录/错词记录,适用于GRE背单词☆11Oct 10, 2019Updated 6 years ago
- ☆30Aug 27, 2025Updated 8 months ago
- ☆15May 29, 2024Updated last year
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Mar 22, 2023Updated 3 years ago
- ☆17Jun 22, 2024Updated last year
- Simulation and optimization of cell clusters.☆12Aug 25, 2025Updated 8 months ago