A Predictive World Model of the Transcriptome
☆35Oct 18, 2025Updated last year
Alternatives and similar repositories for GeneJEPA
Users that are interested in GeneJEPA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single cell manifold generator (SCMG)☆15Oct 22, 2026Updated last week
- Applying JEPA based architectures to bio☆17Aug 13, 2026Updated 2 months ago
- PIE is a perturbation effect prediction model that generalizes to unseen biological conditions☆62Updated this week
- Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks☆17Nov 5, 2024Updated last year
- Group-wise release of ProtiCelli, including core code deveplopment.☆29Sep 15, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Contrastive pre-training for technology-agnostic single-cell representations beyond reconstruction☆39Oct 15, 2026Updated 2 weeks ago
- ☆31Dec 15, 2025Updated 10 months ago
- ☆24Oct 15, 2026Updated 2 weeks ago
- Conditional Monge Gap (2026; Nature Machine Intelligence)☆25Aug 10, 2026Updated 2 months ago
- X-Cell: a diffusion language model for genome-scale perturbation prediction☆129Mar 16, 2026Updated 7 months ago
- ☆16Apr 13, 2026Updated 6 months ago
- ☆86Jan 9, 2026Updated 9 months ago
- ☆15Nov 18, 2025Updated 11 months ago
- Nature Computational Science: Predicting drug responses of unseen cell types through transfer learning with foundation models☆43Feb 2, 2026Updated 8 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Tahoe-x1 is a single cell foundation model designed for gigascale datasets☆167Aug 25, 2026Updated 2 months ago
- GenePert: Leveraging GenePT Embeddings for Gene Perturbation Prediction☆24Oct 29, 2024Updated 2 years ago
- ☆10Aug 28, 2024Updated 2 years ago
- ☆29Jan 10, 2025Updated last year
- ☆26Oct 2, 2026Updated 3 weeks ago
- UniCure: A Foundation Model for Predicting Personalized Cancer Therapy Response☆24Updated this week
- InstaNovo-FM: a self-supervised foundation model for proteomics☆14Updated this week
- Codebase for training the SubCell models☆25Updated this week
- ☆17Jul 8, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Causal Differential Networks (ICML 2025)☆17Jun 3, 2025Updated last year
- A repository for reproducing experiments from the TxPert paper☆55Mar 25, 2026Updated 7 months ago
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆72Updated this week
- ☆44May 26, 2026Updated 5 months ago
- ☆24Aug 17, 2026Updated 2 months ago
- Advancing Morphology Representations for Image-based Drug Discovery☆11Mar 12, 2026Updated 7 months ago
- ☆18Dec 19, 2025Updated 10 months ago
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆83Updated this week
- CellDrift: temporal perturbation effects for single cell data☆14Dec 3, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- CellNavi is a deep learning framework designed to predict genes driving cellular transitions.☆57Jul 10, 2026Updated 3 months ago
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆41Oct 5, 2026Updated 3 weeks ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆41Jul 29, 2025Updated last year
- ☆12Sep 8, 2023Updated 3 years ago
- Stack is a single-cell foundation model that enables in-context learning at inference time.☆169Apr 28, 2026Updated 6 months ago
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆10Oct 30, 2023Updated 3 years ago
- ☆16Dec 13, 2025Updated 10 months ago