Alternatives and similar repositories for Porter5

Users that are interested in Porter5 are comparing it to the libraries listed below

• psipred / DeepCov
  Fully convolutional neural networks for protein residue-residue contact prediction
  ☆43Updated 6 years ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆58Updated 6 months ago
• tadorfer / protlearn
  A Python package for extracting protein sequence features
  ☆62Updated 3 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆60Updated last week
• cmbi / dssp
  The DSSP building software
  ☆50Updated 2 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆48Updated 3 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated last year
• cmbi / hssp
  Create DSSP and HSSP files
  ☆94Updated last year
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆72Updated 8 months ago
• largelymfs / deepcontact
  DeepContact Software
  ☆26Updated 7 years ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 7 months ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆34Updated 5 months ago
• fhalab / embeddings_reproduction
  ☆127Updated 4 years ago
• aqlaboratory / rgn2
  ☆109Updated 2 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆63Updated 10 months ago
• alexarnimueller / LSTM_peptides
  Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
  ☆77Updated 2 years ago
• sokrypton / map_align
  Contact map alignment
  ☆42Updated 5 years ago
• soedinglab / CCMpred
  Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.
  ☆112Updated 2 years ago
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆76Updated 5 years ago
• psipred / protein-vae
  Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies
  ☆94Updated 2 years ago
• labstructbioinf / DeepCoil
  Fast and accurate prediction of coiled coil domains in protein sequences. ​
  ☆27Updated 2 years ago
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated 2 years ago
• realbigws / RaptorX_Property_Fast
  RaptorX-Property: a Standalone Package for Protein Structure Property Prediction
  ☆19Updated 6 years ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆26Updated last year
• nstrodt / UDSMProt
  Protein sequence classification with self-supervised pretraining
  ☆82Updated 4 years ago
• idptools / metapredict
  A machine learning based protein disorder predictor.
  ☆27Updated 3 months ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago