ericmjl / protein-interaction-networkLinks
Computes a molecular graph for protein structures.
☆58Updated this week
Alternatives and similar repositories for protein-interaction-network
Users that are interested in protein-interaction-network are comparing it to the libraries listed below
Sorting:
- DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity☆48Updated 2 years ago
- ☆35Updated 4 years ago
- A Python 3 version of the protein descriptor package propy☆47Updated 2 years ago
- A convolutional neural network for classifying binding pockets based on spatial and chemical information extracted from the pockets.☆105Updated 4 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Updated 10 months ago
- Machine Learning Designs Non-Hemolytic Antimicrobial Peptides☆35Updated 4 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆35Updated 4 years ago
- Paratope Prediction using Deep Learning☆61Updated 2 years ago
- A multiple-layer inter-molecular contact features based deep neural network for protein-ligand binding affinity prediction☆83Updated 5 years ago
- 🔥 PyTorch implementation of GNINA scoring function for molecular docking☆72Updated 10 months ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆94Updated 2 years ago
- ☆76Updated 3 years ago
- Learning with uncertainty for biological discovery and design☆34Updated 2 years ago
- a novel DTA predition method using graph neural network☆76Updated 2 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆43Updated 2 years ago
- Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.☆60Updated 4 years ago
- Database of Interacting Protein Structures (DIPS)☆103Updated last year
- Peptide optimization with Machine Learning☆78Updated 3 years ago
- RXN for biochemical reactions☆73Updated 3 years ago
- Fast and easy contact prediction.☆38Updated last year
- ☆29Updated 5 years ago
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- Python for chemoinformatics☆52Updated 6 years ago
- Graph Network for protein-protein interface☆120Updated last year
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆52Updated 4 months ago
- Fusion models for Atomic and molecular STructures (FAST)☆92Updated 2 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆71Updated last year
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆108Updated 4 months ago
- Protein Interface Prediction using Graph Convolutional Networks☆93Updated 5 years ago
- Code for our paper "Protein sequence design with a learned potential"☆81Updated 2 years ago