Alternatives and similar repositories for NGS_Workshop_Advanced_Bioinformatics

Users that are interested in NGS_Workshop_Advanced_Bioinformatics are comparing it to the libraries listed below

• NBISweden / workshop-mlbiostatistics
  ☆16Updated this week
• ashleymaeconard / TIMEOR
  TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
  ☆16Updated 3 years ago
• zhongw2 / GeneTEFlow
  ☆23Updated 4 years ago
• igbb-popescu-lab / NetSeekR
  A networks analysis pipeline for RNASeq time series data
  ☆14Updated 4 years ago
• dzhakparov / GeneSelectR
  ☆19Updated last year
• CBC-UCONN / RNA-seq-with-reference-genome-and-annotation
  ☆22Updated 4 months ago
• nf-core / dualrnaseq
  Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.
  ☆22Updated this week
• gagneurlab / FRASER-analysis
  Accompanying analysis code for the FRASER manuscript
  ☆26Updated 4 years ago
• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 6 years ago
• mingyi-wang / somatic-combiner
  ☆10Updated 4 years ago
• BioinfoUNIBA / QEdit
  RNA editing quantification in deep transcriptome data
  ☆15Updated 2 years ago
• shahcompbio / wgs
  Whole genome workflows
  ☆12Updated 6 months ago
• KHP-Informatics / DNAscanv2
  DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…
  ☆14Updated last year
• adigorla / xgap
  xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …
  ☆10Updated 4 years ago
• costasilvati / consexpression
  Tool for RNA-Seq analysis.
  ☆39Updated 3 years ago
• bharani-lab / WES-Benchmarking-Pipeline_Manoj
  Benchmarking of aligners and variant callers for Whole Exome Sequencing data
  ☆19Updated 6 years ago
• ucdavis-bioinformatics-training / 2018-June-RNA-Seq-Workshop
  Focused multi-day workshop covering the material needed for a successful RNA-Seq experiment.
  ☆16Updated 6 years ago
• jsh58 / DMRfinder
  Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data
  ☆28Updated last year
• IrinaVKuznetsova / CirGO
  ☆21Updated last year
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆19Updated 2 years ago
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆35Updated 11 months ago
• NCBI-Hackathons / HLAClustRView
  R package specialized in HLA typing clustering and visualization based on specific similarity metrics
  ☆12Updated 5 years ago
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆33Updated 2 years ago
• fusiontranscripts / FusionBenchmarking
  Toolkit for benchmarking fusion transcript predictions
  ☆19Updated 9 months ago
• djhn75 / RNAEditor
  ☆15Updated 2 years ago
• parklab / SCAN2
  SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)
  ☆12Updated 2 weeks ago
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 5 years ago
• PSSUN / CircCode
  A Python3-base pipeline for translated circular RNA(circRNA) identification
  ☆16Updated 2 years ago
• frattalab / splicing
  Snakemake pipeline for running MAJIQ
  ☆23Updated last year
• JD2112 / methylr
  methylR: a single shiny solution from sequencer data to pathway analysis
  ☆12Updated 7 months ago