Alternatives and similar repositories for NGS_Workshop_Advanced_Bioinformatics

Users that are interested in NGS_Workshop_Advanced_Bioinformatics are comparing it to the libraries listed below

• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 6 years ago
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆19Updated 3 years ago
• dzhakparov / GeneSelectR
  ☆19Updated last year
• zhongw2 / GeneTEFlow
  ☆23Updated 4 years ago
• gagneurlab / FRASER-analysis
  Accompanying analysis code for the FRASER manuscript
  ☆26Updated 4 years ago
• CBC-UCONN / RNA-seq-with-reference-genome-and-annotation
  ☆23Updated 6 months ago
• salbrec / seqQscorer
  ☆22Updated 2 months ago
• jfnavarro / hla_pipeline
  DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions
  ☆11Updated 4 years ago
• nf-core / dualrnaseq
  Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.
  ☆23Updated last month
• Xinglab / IRIS
  IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
  ☆25Updated 11 months ago
• ding-lab / VirusScan
  VirusScan Pipeline
  ☆11Updated 6 months ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 4 years ago
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆13Updated 5 years ago
• bpucker / RNA-Seq_analysis
  scripts for RNA-Seq analysis
  ☆28Updated 3 years ago
• TheJacksonLaboratory / PDX-Analysis-Workflows
  ☆12Updated 6 years ago
• friedue / course_RNA-seq2019
  ☆35Updated 3 years ago
• shahcompbio / wgs
  Whole genome workflows
  ☆12Updated 9 months ago
• NBISweden / workshop-mlbiostatistics
  ☆16Updated last month
• parklab / SCAN2
  SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)
  ☆14Updated 2 weeks ago
• crazyhottommy / single-cell-DNAseq-notes
  ☆16Updated 2 years ago
• oicr-gsi / sequenza
  Workflow for Sequenza, cellularity and ploidy
  ☆20Updated last week
• YuLab-SMU / clusterProfiler_protocol
  omics data analysis using clusterProfiler ;)
  ☆13Updated last year
• vanallenlab / MutPanningV2
  This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…
  ☆12Updated 5 years ago
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 4 years ago
• XueyiDong / LongReadBenchmark
  Benchmarking long-read RNA-seq analysis tools
  ☆27Updated 5 months ago
• maglab / Age-associated_cancer_genome
  ☆13Updated 4 years ago
• gencorefacility / r-notebooks
  Gene Set Enrichment Analysis and Over Representation Analysis analysis using R
  ☆20Updated 6 years ago
• splicebox / MntJULiP
  Comprehensive and scalable differential splicing analyses
  ☆17Updated 5 months ago
• IxI-97 / BiomiX
  R tool to analyse and integrate multiple -omics data
  ☆13Updated 2 months ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 3 weeks ago