Implementations in both Matlab and R of the CIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/s41467-018-06921-8
☆19May 19, 2023Updated 2 years ago
Alternatives and similar repositories for CIMLR
Users that are interested in CIMLR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- QuPath TIL classifier for Melanoma on HE slides☆10Jul 24, 2019Updated 6 years ago
- ☆17May 5, 2020Updated 5 years ago
- Implementation of the spotlight: a method for discovering systematic errors in deep learning models☆11Oct 5, 2021Updated 4 years ago
- Find Co-Abundant Groups of Genes☆11Aug 3, 2020Updated 5 years ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆30Jul 28, 2025Updated 7 months ago
- Framework for analysis of cell-types and Ligand-Receptor cooccurrences☆18Feb 13, 2023Updated 3 years ago
- Imaging Mass Cytometry (IMC) file type support for napari☆12Oct 19, 2023Updated 2 years ago
- ProteoStorm: An Ultrafast Metaproteomics Database Search Framework☆11Jul 15, 2023Updated 2 years ago
- ☆11Oct 10, 2024Updated last year
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Aug 13, 2021Updated 4 years ago
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆13Dec 27, 2023Updated 2 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- Dirichlet-Multinomial Bayesian Variable Selection☆14Jun 13, 2024Updated last year
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 5 years ago
- ☆12Apr 26, 2020Updated 5 years ago
- ☆10Apr 28, 2023Updated 2 years ago
- Predicting oncogenic potential of gene fusions☆13Feb 13, 2016Updated 10 years ago
- ☆12Mar 17, 2026Updated last week
- Converter functions for the MSstats package☆10Mar 3, 2026Updated 3 weeks ago
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated last year
- The COVID-19 Early Warning System (CovEWS) is a real-time early warning system for assessing individual COVID-19 related mortality risk.☆17Apr 25, 2021Updated 4 years ago
- Official Code Repository for Diagnosing Colorectal Polyps in the Wild with Capsule Networks☆16Nov 22, 2022Updated 3 years ago
- Analysis of Cancer Genomes; 2017 edition☆16Jan 21, 2018Updated 8 years ago
- A URL shortening and expanding cli tool.☆11Aug 31, 2020Updated 5 years ago
- convert .kfb format whole slide images to .svs format image for further processing☆16Sep 19, 2020Updated 5 years ago
- Rank Aggregation Algorithms☆12Jul 22, 2014Updated 11 years ago
- ☆23May 8, 2018Updated 7 years ago
- ☆12Jul 31, 2025Updated 7 months ago
- Code and instructions accompanying ICCV'23 paper Protoype-based Dataset Comparison☆18Dec 15, 2023Updated 2 years ago
- Code and Word2Vec embeddings of LOINC codes for KDD 2019 DSHealth paper "Evaluation of Embeddings of Laboratory Test Codes for Patients a…☆11Jun 13, 2024Updated last year
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆11Sep 27, 2023Updated 2 years ago
- Mutational Signature Comprehensive Analysis Toolkit☆15Feb 19, 2026Updated last month
- 代码运行数据☆24Jun 9, 2019Updated 6 years ago
- MLDA: Multi-Label Dataset Analyzer☆15Jun 28, 2018Updated 7 years ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Oct 15, 2020Updated 5 years ago
- A fast, general purpose crypto library in pure Rust.☆21Aug 26, 2018Updated 7 years ago
- A command-line interface and python module for R's GSVA bioconductor package☆13Jul 8, 2018Updated 7 years ago
- ☆13Dec 15, 2021Updated 4 years ago